Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0466 ATGGCGAGGCCAGAAAGGACAGCAGGTAGAAATAAAAGTTTAGAGACTCTAATGGACTCGGACAAACCAGGAATCGGAAGAAATGTGAACCAACTGAAGATTCAGAAGTCCATTCCAGGGTATGGCCTTGAATTTAGTAACCTCTCCTATAGTATCATAAAGAAGCAGAAAAAGGATGGAGTTTGGATCAACAAAGAAACATATCTTCTTCATGATATCTCTGGCCAGGCAATTAAAGGTGAAGTTATGGCAATCATGGGACCTAGTGGTGCTGGCAAGTCCACCTTTCTTGATGCATTGGCCGGTCGAATTGCAAAAGGGAGTCTAGAAGGATCAGTTAGAATTGATGGAAAACCAGTTACTACAAGCTACATGAAAATGGTGTCATCATATGTGATGCAAGATGACCAGCTCTTCCCTATGCTGACAGTTTTTGAGACATTTATGTTTGCAGCTGAAGTTAGGCTTCCTCCTTCCATTTCCAGGAGTGAAAAGAAGAAGAGGGTCTATGAGCTCCTTGACCAATTGGGCTTACAGAGTGCTACACATACCTATATTGGTGACGAAGGGAGAAGAGGAGTGTCAGGAGGGGAACGACGAAGGGTGTCTATTGGCATAGACATCATTCATAAGCCATCACTTCTGTTCCTTGACGAACCTACTTCAGGCCTTGATTCTACAAGTGCTTACAGTGTTGTAGAAAAGGTTAAAGACATAGCTCGAGGAGGAAGCATTGTCCTTATGACCATACACCAGCCTTCATTTAGAATTCAAATGCTCCTGGACCAGATCACCGTCCTTGCAAGGGGAAGACTGATATACATGGGAAAGGCAGATGAAGTTCAGGCTCACATGTCAAGATTTGGAAGGCCTGTACCTGATGGAGAAAACAGTATTGAGTATCTCCTAGATGTTATCAGTGAATATGATCAAGCAACGGTTGGGCTTGATCCCCTTGTCCAATTCCAACGTGATGGCCTCAAACCTCACCCGGCAGCCATGACGCCGGTTCCAAGAACACCTTACAAAAGGAACACACCTGCATCCAAACACATGATTAGCCTACGCAGCCAAGGATTTACTGCCGGAACACAACAGCCTGATTCTGCGGACGACGAAGACGACGACGATGCTGAGGATTTTGATAACTCCCTTGAAAGGAAAAGTGCTCCAACACCAAGGAATATGACTAGTGGTGTTCACCAACGTTTGGCTTCTCAGTTCTACCAAGATTTCTCGGCCAAAGATTTCTCTGTCTGGCTTTACCATGGGGTAGTAGGAACCCCACGTCGCCAACCATCATGGACTCCAGCAAGAACTCCAGGATGGACACCTGGGAAAACACCCATGTCAGGACCAACAAGTGCAGTTTCCAACCAATATTCTGCAGCTCCTTTTGTGGTTGGCCAGTCTATGGACTACTCCGCAACTTCATATGAAGGATTTGAGATTGAGGAAGTGCTTGATGAGCCAAACTTTGGATCCAAGTATGCAAACCCATGGTTGCGTGAGGTTGCAGTGCTCTCATGGCGAACAGCACTCAATGTAATTCGCACCCCAGAACTCTTCCTCTCCCGTGAGATTGTGTTAGCTGTTATGGCACTTATCCTGTCCAGCATTTTTGGAAATCTGAGTCATCCTTTTTTCGAAGACATCAATAGGCTCCTCAATTTCTACATCTTTGCAGTGTGCCTTGTTTTCTTTTCTTCCAATGATGCAGTCCCATCTTTTATCATGGAGAGGTTCATCTTCATAAGGGAGACTTCACATAATGCTTACCGTGCTTCTTCATATGTCATTTCTTCCCTCATTGTTTACCTCCCATTTTTTGCCGTTCAAGGCTTCACATTTGCTGTCATAACCAAAAAGATGCTCCACTTGAGAAGCAGCCTATTGTATTTCTGGCTAATACTTTATGCCTCGCTTATTACTACCAATGCATATGTGATGCTTGTTAGTGCACTTGTGCCTAGTTACATCACAGGGTATGCAGTAGTCATAGCCACAACAGCACTCTTCTTTTTGACCTGTGGTTTCTTCCTCAAGCGAACTCAGATACCCTTTTACTGGATGTGGCTTCACTATATTTCTGCAATCAAATATCCATTTGAGGCATTGCTCACAAATGAATTCAATAACCTCAACTGCTACACAGGAAATTTAGCAGAATTATCCCATGGACCATTAGGAGACCTGAAGCTCAGCAAACACCATAACTCCAGTCTGCCCGCTAACTGTTTATTAGGGAAAGATATCTTGTCCTCGATGGATATTACAATGGATAACATATGGTATGACATCTTAATCCTGCTAGCTTGGGATGTTCTTTACAGGTTCTTCTTCTATTTGGTTTTGAGATTTTACTCCAAGAATGAGAGGAAATGA 2385 0.4377 MARPERTAGRNKSLETLMDSDKPGIGRNVNQLKIQKSIPGYGLEFSNLSYSIIKKQKKDGVWINKETYLLHDISGQAIKGEVMAIMGPSGAGKSTFLDALAGRIAKGSLEGSVRIDGKPVTTSYMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISRSEKKKRVYELLDQLGLQSATHTYIGDEGRRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDSTSAYSVVEKVKDIARGGSIVLMTIHQPSFRIQMLLDQITVLARGRLIYMGKADEVQAHMSRFGRPVPDGENSIEYLLDVISEYDQATVGLDPLVQFQRDGLKPHPAAMTPVPRTPYKRNTPASKHMISLRSQGFTAGTQQPDSADDEDDDDAEDFDNSLERKSAPTPRNMTSGVHQRLASQFYQDFSAKDFSVWLYHGVVGTPRRQPSWTPARTPGWTPGKTPMSGPTSAVSNQYSAAPFVVGQSMDYSATSYEGFEIEEVLDEPNFGSKYANPWLREVAVLSWRTALNVIRTPELFLSREIVLAVMALILSSIFGNLSHPFFEDINRLLNFYIFAVCLVFFSSNDAVPSFIMERFIFIRETSHNAYRASSYVISSLIVYLPFFAVQGFTFAVITKKMLHLRSSLLYFWLILYASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPFYWMWLHYISAIKYPFEALLTNEFNNLNCYTGNLAELSHGPLGDLKLSKHHNSSLPANCLLGKDILSSMDITMDNIWYDILILLAWDVLYRFFFYLVLRFYSKNERK* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0466 794 MobiDBLite consensus disorder prediction 358 399 - -
Gso8g0466 794 PANTHER ABC TRANSPORTER 6 788 - -
Gso8g0466 794 MobiDBLite consensus disorder prediction 327 346 - -
Gso8g0466 794 ProSitePatterns ABC transporters family signature. 194 208 IPR017871 GO:0005524
Gso8g0466 794 Gene3D - 43 289 IPR027417 -
Gso8g0466 794 SMART AAA_5 79 279 IPR003593 -
Gso8g0466 794 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 43 294 IPR003439 GO:0005524
Gso8g0466 794 MobiDBLite consensus disorder prediction 1 21 - -
Gso8g0466 794 CDD ABCG_EPDR 43 276 - -
Gso8g0466 794 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 6 788 - -
Gso8g0466 794 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 288 IPR027417 -
Gso8g0466 794 MobiDBLite consensus disorder prediction 1 17 - -
Gso8g0466 794 MobiDBLite consensus disorder prediction 430 455 - -
Gso8g0466 794 Pfam ABC-2 type transporter 505 711 IPR013525 GO:0016020|GO:0140359
Gso8g0466 794 MobiDBLite consensus disorder prediction 433 455 - -
Gso8g0466 794 Pfam ABC transporter 70 222 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0466 Gso-Chr8 4302980 4306082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0466 69 295 Calmodulin-binding Proteins AT2G36910 29.130 3.67e-15 78.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g2106 5 43993270 43996315 Gso8g0466 8 4302980 4306082 GST