Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0461 ATGTCTTCTCGCTTAGATGAGTGCTTGTTAGAGGTGGATGGGTACGGTGATGGCGATGGAAAGGCGAAACCCAAATTCCTGATAAGGAATCTCAGCAGAGTTTCGGAGGATGGGGTTCCCATCCTCAAAGGCATAAATCTTGAGATCCCAGAGGGTGTGATCGTGGGAGTGATAGGCCCCAGTGGTAGCGGCAAGTCAACGTTCTTGAGGGCCCTTAACCGCCTCTGGGAGCCACCCTCCGCCTCCGTCTTCCTCGACGCCCAAGACATCTGCCATCTCGATGTCCTCTCTCTCCGCCGTAACGTTGCCATGCTCTTTCAGCTCCCGGCCCTCTTTGAAGGCAGCGTTGCGGACAATGTGAGGTACGGACCACAACTCAGAGGGAAAAAGCTAAGCGATGATGAGGTGCGCAAGTTGCTTCTAATGGCCGACCTGGATGCTTCTTTCATGGATAAGTCCGGGGCTGAACTCTCTGTCGGTCAAGCTCAAAGAGTTGCACTTGCTAGGACTTTAGCTAATTCACCACAGGTTTTGTTGCTGGATGAGCCAACTAGTGCCTTAGATCCAATATCGACAGAAAACATAGAGGATGCCCTGGTGAAGCTGAACAAGAATCAGGGCATGACAGTCATCATGGTCTCTCATAGCATCAAGCAAATCCAAAGGATCGCTCACATAGTGTGCCTGCTTGTTGATGGTGAAATTGTTGAAGTTCTCAACCCTCATAATCTCTCTCAGGCCAACCATCCCATGGCTAAGAGGTTTCTTCAACTCAGTTCTTAA 783 0.5045 MSSRLDECLLEVDGYGDGDGKAKPKFLIRNLSRVSEDGVPILKGINLEIPEGVIVGVIGPSGSGKSTFLRALNRLWEPPSASVFLDAQDICHLDVLSLRRNVAMLFQLPALFEGSVADNVRYGPQLRGKKLSDDEVRKLLLMADLDASFMDKSGAELSVGQAQRVALARTLANSPQVLLLDEPTSALDPISTENIEDALVKLNKNQGMTVIMVSHSIKQIQRIAHIVCLLVDGEIVEVLNPHNLSQANHPMAKRFLQLSS* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0461 260 ProSitePatterns ABC transporters family signature. 157 171 IPR017871 GO:0005524
Gso8g0461 260 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 26 257 IPR003439 GO:0005524
Gso8g0461 260 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 17 260 - -
Gso8g0461 260 SMART AAA_5 51 237 IPR003593 -
Gso8g0461 260 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 17 260 IPR005670 GO:0005315|GO:0016020|GO:0035435
Gso8g0461 260 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 247 IPR027417 -
Gso8g0461 260 CDD ABC_PstB_phosphate_transporter 28 242 IPR005670 GO:0005315|GO:0016020|GO:0035435
Gso8g0461 260 Pfam ABC transporter 42 185 IPR003439 GO:0005524
Gso8g0461 260 Gene3D - 27 259 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0461 Gso-Chr8 4272996 4274434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0461 30 258 Calmodulin-binding Proteins AT2G36910 30.290 3.63e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0461 K02068 - gmx:100791365 487.263