Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0456 ATGGAAGACTTACTCGGCCTTTTAAGGATTCACATCAAGCGCGGTGTCAACCTCGCCGTTCGTGATGTCAATACTAGCGATCCATACGTCGTCGTTAAGATGGGCAAGCAGAAGCTGAAGACTCGTGTGATTAAAAAGGATGTTAATCCTGAGTGGAAGGAAGATCTTACGCTTTCTGTTACAGATCCAATTCATCCATTTATACTGACAGTGTATGACTATGACACTTTCAGCAAGGATGACAAAATGGGAGATGCAGAATGTGACATCTCAGCATACATAGAAGCCTTAAAGATGAACTTAGAAGACCTCCCCAGTGGTACTATAATCACAAGAATACAACCAAGCAGGCAAAACTGTCTGGCGGAGGAAAGTTGCATCACTTATAGCAATGGCAAAGTTATCCAAGATCTTGTCCTTAGATTGCGACACGTGGAAAGCGGTGAAGTGGAAATCCAATTGCAATGGATTAATCTTCCTGGCTCCAAGGGTTTATGA 498 0.4297 MEDLLGLLRIHIKRGVNLAVRDVNTSDPYVVVKMGKQKLKTRVIKKDVNPEWKEDLTLSVTDPIHPFILTVYDYDTFSKDDKMGDAECDISAYIEALKMNLEDLPSGTIITRIQPSRQNCLAEESCITYSNGKVIQDLVLRLRHVESGEVEIQLQWINLPGSKGL* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0456 165 CDD C2_ArfGAP 5 148 - -
Gso8g0456 165 Gene3D C2 domain 3 163 IPR035892 -
Gso8g0456 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 164 IPR044562 -
Gso8g0456 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 91 IPR035892 -
Gso8g0456 165 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Gso8g0456 165 SMART C2_3c 7 102 IPR000008 -
Gso8g0456 165 Pfam C2 domain 6 92 IPR000008 -
Gso8g0456 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE 1 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0456 Gso-Chr8 4241023 4242334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0456 38 165 C2H2 Transcription Factor Family AT1G70790 57.692 2.45e-49 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0456 - - gmx:100799469 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g0456 8 4241023 4242334 Gso7g0865 7 9855389 9860267 PCT
Gso8g0456 8 4241023 4242334 Gso9g1451 9 38587325 38589198 PCT
Gso7g0865 7 9855389 9860267 Gso8g0456 8 4241023 4242334 PCT
Gso9g1451 9 38587325 38589198 Gso8g0456 8 4241023 4242334 PCT