Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0451 ATGTGGATGGTTGGTTACAATGAAGGAGGTGAGTTCAACATGGCCGATTATGGATTCAATGGAAGGAAACTCAGGCCTCTCATGCCAAGGCCAGTCACTTCTCCTAACAATACTTCAAACGCTAACTCTCCATACTTGACCCGCATTCATCATGGCAACGATTTCTTTTCACAGTATCACAATCTTGATCAGGGAAAGAGAGAGTTCAACCCTCCACCAGTAGTGGTGAGTTCAAGGTGGAATCCAACCCCAGAGCAACTGAGAGCATTGGAGGAATTGTATAGAAGAGGGACAAGAACACCATCTGCGGAGCAAATCCAACAAATCACGGCACAGCTTAGGAGGTTTGGAAAAATTGAAGGGAAGAATGTCTTCTATTGGTTTCAGAATCACAAAGCAAGAGAAAGACAGAAACGCCGCCGTCAAATGGAGTCAGTTGTAGCTGAGGGTCATCACACCCGTGACTTTGATAGTACTCTTGAAAAGAAAGACTTCGGCGCAAGTAGGACAGTGCTTGAAGTTGAACAGACCAAGAACTGGGCACCCTCTACAAACTGCAGTACTCTTGCAGAGGAATCTGTTACAATACAAAGGGCAGCAAAAGCAGCCATTGCAGAGTGTAGAACAGATGGATGGCTCCAATTCGATGAAGGAGAGTTACAACATAGAAGAAACTTTATGGAGAGGAATGCCACGTGGCATATGATGCAGTTACCTTGTCCTCCCCCTCCTACAGTTTCACCCCACCTCATAAACACACCATCTCCTACTACTAGCATGGCCCCCGCAACCACAGTAACAGCAAGACTAATGGACCCAAAGCTCATTAAGACTCATGATCTCAGCTTCTTTATTTCACCTAACACTAACAGAGAAAACGGTATTATCCACTTAAGCAGTATCAGCACCCAGGATCATAATAATTCTGTGGAATCTCAAACCCTTCAACTTTTTCCAATAAGGAACAACGCGGATGAAAGCAGCTGTGATAACATCAACCACCAAAAAGAGACAGAGGTATCCGTTTCAGCAATGAATGCACCCAGCCAGTTTTTTGAGTTCCTTCCATTGAAGAACTGA 1080 0.4463 MWMVGYNEGGEFNMADYGFNGRKLRPLMPRPVTSPNNTSNANSPYLTRIHHGNDFFSQYHNLDQGKREFNPPPVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESVVAEGHHTRDFDSTLEKKDFGASRTVLEVEQTKNWAPSTNCSTLAEESVTIQRAAKAAIAECRTDGWLQFDEGELQHRRNFMERNATWHMMQLPCPPPPTVSPHLINTPSPTTSMAPATTVTARLMDPKLIKTHDLSFFISPNTNRENGIIHLSSISTQDHNNSVESQTLQLFPIRNNADESSCDNINHQKETEVSVSAMNAPSQFFEFLPLKN* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0451 359 Pfam Homeodomain 78 137 IPR001356 GO:0003677
Gso8g0451 359 ProSiteProfiles 'Homeobox' domain profile. 83 138 IPR001356 GO:0003677
Gso8g0451 359 CDD homeodomain 79 139 IPR001356 GO:0003677
Gso8g0451 359 PANTHER WUSCHEL, PUTATIVE-RELATED 34 359 - -
Gso8g0451 359 SMART HOX_1 75 142 IPR001356 GO:0003677
Gso8g0451 359 SUPERFAMILY Homeodomain-like 78 144 IPR009057 -
Gso8g0451 359 Gene3D - 76 138 - -
Gso8g0451 359 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 34 359 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0451 Gso-Chr8 4197017 4200084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0451 1 359 Wox Gene Family AT3G18010 39.119 3.12e-67 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gso8g0451 Homeodomain 9.7e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0451 - - gmx:100785161 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g2095 5 43909623 43912795 Gso8g0451 8 4197017 4200084 GST