Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0442 ATGAAGAACATTCTTAAGAAGCTTCATATCATGTCCAATCAATCAGAAGATGCCCAAGGGGCTACTTCATCAAAGAGCAACAAGTCCAGTAGTGATGGTTCATCTTCATCCACTGCCCCAAAGAAGCTTTCCAATTGGTTGCATTCAGTTTCTAATAGGCAGAGTCCCAGTCCTCCATCTCCCAACCTGGCTAGAGGAGAAATAATGGACCCGTCTGATTCAGTGAGCAGTGGTGGTTTGGATGTTGTGTCTGATTCAGCGAGGCGTGATTCGGAGTCTAGCACGTCGAGGGATCCTGAAGTGGAGGAGGAGTATCAGATACAACTGGCTTTGGAGCTGAGTGCAAAAGAGGATCCTGAGGCTGTACAGATTGAAGCTGTTAAGCAGATCAGTTTGGGATCCTGTGACCCTGATAATACGCCAGCTGAAGTTGTGGCCTACCGTTACTGGAATTACAATGCTCTTGGTTATGATGACAAAATCTCAGATGGTTTCTATGATCTGTATGGGATCTTGACCGAGGCAACCTCTGCAAGAATGCCTTCTCTTGTAGATCTGCAAGGAACACCGACCTCAGATGATGTCACATGGGAAGCAGTCCTGGTCAATAGGGCTGCTGATTCAAATTTGTTGAAACTTGAACAAGAAGCCATGGAGATGGCCGTCAATTCAAGAAAAGATTTTGAAGTAGTTTTAGATAGTGATTTGGTACACAAGCTTGCAATAGTAGTGGCTGAATATATGGGTGGATCAGTTGAAGATCACGAAAGTATGTTAAGAGCATGGAGGAGTCTTAGTTACAGTCTAAAAGCAACCCTCGGTAGCATGGTTTTGCCACTTGGTTCACTGACCATTGGATTGGCTCGGCATCGTGCATTGTTATTCAAGGTTTTAGCTGACACTTTGGGCATCCCGTGTCGATTGGTGAAAGGACTGCAGTATATGGGTTCCAACGATGTGGCAATGAACTTTGTCAAGATTGAGGATGGAAGGGAGTACATTGTTGACCTAATGGCAGCTCCTGGAACACTTATTCCATCTGATGCTACTGGATCACACATTGAGTGTGACGATTCTTCCTTTGTAGCCAGTCCTTCATCAAGAGAGCTTGATTCTCATGTAGCATCGTTCAGCAGTGGGGTTGGAAGTTCATCTGAAGAAGCTTCTGACTCTGGTACTCTGGATAAAGATAATAAATCAAAGTATTTTGGCTATGCAAGGAAAGAATCCAATGTAAGCGGGGCTGCTACGGGCAAGGAAGAATTGAAGAGACCATCAAATGAATCCAAAAATACCCCCTATGAGGAGAAGATCATACTGCAAGAATCCCCTATCAGATCTAATTATCCATATATGCATGGAAGATCTCCTTCTTGGACTGAAGGGATCAGTTCCCCTGCCGTGCGTAGAATGAAAGTCAAAGATGTTTCCCAATATATGATTGATGCTGCTAAGGAGAACCCTAACTTGGCTCAAAAACTTCATGATATTTTGCTTGAAAGTGGTGTTGTTGCACCTCCAAACTTATTTTCTGAAATTTATCATGGGCAGTTAAGTACCCCAACCGAGGCCAATTTTCCAACTGAACAAAAAGATGAAAATAAACAAGGAAGTGTGCAGCAAGAAACTAAGACTGATGACAATCTAGTTCCTGCTCGATTTTTGCCTCCTTTGCCTCACCACCGAGTTCACCGCAAAGTAACTCCTAGCAGTAGCAGTCAGCTGGAGCATTCTAAGCCTGTTGAGGGCTTAGGAATTGGCCTTCCTCTTGATTCAGGGGAAGCTGCTGGACAGCACATATCATCACAGGTAGAAGCAACTCAGGTAAAGTATGGGAAAAATATGCCAGTTGCGGCAGCTGCAGCTGCAGCTGCTGCTGTTGTTGCATCTTCTATGGTAGTTGCTGTAACAAAGTCGAACGCTGACTCGAATCTTGAGATTCCTGTAGCAGCAGCTGCTACTGCTACTGCTGCAGCTGTTGTAGCAACCACTGCTGCTGTAAGTAAGCAGTATGAGCAGGGAAGTTGGAGTGGTGGTGATACAGAGGGTGCTGGTTGTGAGCCGAAGTGTAGTGGTGATGGAGAGCATAATGCTTTAGGAGAAAACACAGAAGGCGAGAGAAAATCTGATCGATCAGTAAGTAATGACAGCACAAAGTCTGATTCAGCGCTAGATGATGTTGCTGAGTATGATATTCCGTGGGATGAAATTGCGGTGGGAGAGCGTATTGGACTTGGATCATATGGGGAAGTTTACCGTGGTGAATGGCATGGAACTGAAGTTGCTGTAAAAAAGCTTCTATATCAAGATATCTCTGGTGAATTACTTGAAGAATTCAAAAGTGAGGTCCAAATAATGAAAAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTGTAACTCGACCTCCAAATCTTTCAATTGTTTCTGAATTTCTTCCTAGAGGGAGTTTGTATAGATTAATTCACCGACCTAACAATCAATTAGATGAGCGAAGGAGGTTGCGGATGGCCCTTGATGCTGCTCGAGGAATGAACTATCTGCACAACTGCACTCCAGTGATAGTGCATCGTGATTTGAAGTCCCCAAATCTTCTTGTTGACAAAAACTGGGTAGTAAAGGTATGTGATTTTGGCTTATCACGAATGAAGCATAGTACATTCCTTTCTTCCAGATCAACGGCAGGAACAGCTGAGTGGATGGCTCCAGAAGTGTTGAGAAATGAACTTTCAGATGAAAAGTGTGACGTTTTTAGCTATGGGGTCATACTATGGGAGCTCTCTACTTTGCAGCAACCCTGGGGAGGAATGAATCCGATGCAAGTAGTGGGTGCTGTTGGTTTCCAACATCGCCGCCTTGACATTCCAGATAATGTAGACCCTGCCATTGCAGATATTATCAGACAATGCTGGCAGACTGATCCAAAGTTGAGGCCCACGTTTACTGAAATCATGGCTGCTTTAAAGCCATTGCAGAAGCCAATTACTGCTTCTCAAGTGCATAGACTAAGTGTTCAGTCATCACGAGTTGCTGAAGACCCCGCAGGATAG 3054 0.444 MKNILKKLHIMSNQSEDAQGATSSKSNKSSSDGSSSSTAPKKLSNWLHSVSNRQSPSPPSPNLARGEIMDPSDSVSSGGLDVVSDSARRDSESSTSRDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKISDGFYDLYGILTEATSARMPSLVDLQGTPTSDDVTWEAVLVNRAADSNLLKLEQEAMEMAVNSRKDFEVVLDSDLVHKLAIVVAEYMGGSVEDHESMLRAWRSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADTLGIPCRLVKGLQYMGSNDVAMNFVKIEDGREYIVDLMAAPGTLIPSDATGSHIECDDSSFVASPSSRELDSHVASFSSGVGSSSEEASDSGTLDKDNKSKYFGYARKESNVSGAATGKEELKRPSNESKNTPYEEKIILQESPIRSNYPYMHGRSPSWTEGISSPAVRRMKVKDVSQYMIDAAKENPNLAQKLHDILLESGVVAPPNLFSEIYHGQLSTPTEANFPTEQKDENKQGSVQQETKTDDNLVPARFLPPLPHHRVHRKVTPSSSSQLEHSKPVEGLGIGLPLDSGEAAGQHISSQVEATQVKYGKNMPVAAAAAAAAAVVASSMVVAVTKSNADSNLEIPVAAAATATAAAVVATTAAVSKQYEQGSWSGGDTEGAGCEPKCSGDGEHNALGENTEGERKSDRSVSNDSTKSDSALDDVAEYDIPWDEIAVGERIGLGSYGEVYRGEWHGTEVAVKKLLYQDISGELLEEFKSEVQIMKRLRHPNVVLFMGAVTRPPNLSIVSEFLPRGSLYRLIHRPNNQLDERRRLRMALDAARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNELSDEKCDVFSYGVILWELSTLQQPWGGMNPMQVVGAVGFQHRRLDIPDNVDPAIADIIRQCWQTDPKLRPTFTEIMAALKPLQKPITASQVHRLSVQSSRVAEDPAG* 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0442 1017 MobiDBLite consensus disorder prediction 373 396 - -
Gso8g0442 1017 MobiDBLite consensus disorder prediction 8 61 - -
Gso8g0442 1017 MobiDBLite consensus disorder prediction 699 715 - -
Gso8g0442 1017 ProSitePatterns Protein kinases ATP-binding region signature. 743 765 IPR017441 GO:0005524
Gso8g0442 1017 SUPERFAMILY Protein kinase-like (PK-like) 722 988 IPR011009 -
Gso8g0442 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 856 868 IPR008271 GO:0004672|GO:0006468
Gso8g0442 1017 Gene3D Transferase(Phosphotransferase) domain 1 816 1001 - -
Gso8g0442 1017 MobiDBLite consensus disorder prediction 85 103 - -
Gso8g0442 1017 MobiDBLite consensus disorder prediction 673 724 - -
Gso8g0442 1017 MobiDBLite consensus disorder prediction 373 389 - -
Gso8g0442 1017 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 1007 - -
Gso8g0442 1017 MobiDBLite consensus disorder prediction 1 103 - -
Gso8g0442 1017 Pfam Ethylene-responsive protein kinase Le-CTR1 142 345 - -
Gso8g0442 1017 Gene3D Phosphorylase Kinase; domain 1 730 814 - -
Gso8g0442 1017 Pfam Protein tyrosine and serine/threonine kinase 738 989 IPR001245 GO:0004672|GO:0006468
Gso8g0442 1017 CDD STKc_MAP3K-like 743 989 - -
Gso8g0442 1017 PRINTS Tyrosine kinase catalytic domain signature 811 824 IPR001245 GO:0004672|GO:0006468
Gso8g0442 1017 PRINTS Tyrosine kinase catalytic domain signature 850 868 IPR001245 GO:0004672|GO:0006468
Gso8g0442 1017 PRINTS Tyrosine kinase catalytic domain signature 897 907 IPR001245 GO:0004672|GO:0006468
Gso8g0442 1017 PRINTS Tyrosine kinase catalytic domain signature 916 938 IPR001245 GO:0004672|GO:0006468
Gso8g0442 1017 PRINTS Tyrosine kinase catalytic domain signature 960 982 IPR001245 GO:0004672|GO:0006468
Gso8g0442 1017 SMART serkin_6 737 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0442 1017 MobiDBLite consensus disorder prediction 520 534 - -
Gso8g0442 1017 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 1007 - -
Gso8g0442 1017 MobiDBLite consensus disorder prediction 520 550 - -
Gso8g0442 1017 ProSiteProfiles Protein kinase domain profile. 737 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0442 Gso-Chr8 4125126 4133651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0442 1 1003 MAP Kinase Kinase Kinase AT1G73660 62.427 0.0 1147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Gso8g0442 PK_Tyr_Ser-Thr 7.1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0442 - - gmx:100780884 1904.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g0442 8 4125126 4133651 Gso7g0858 7 9726365 9739560 PCT
Gso8g0442 8 4125126 4133651 Gso9g1457 9 38669114 38682256 PCT
Gso7g0858 7 9726365 9739560 Gso8g0442 8 4125126 4133651 PCT
Gso9g1457 9 38669114 38682256 Gso8g0442 8 4125126 4133651 PCT