Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0406 ACAGGATATGGCGCTGTAGGGTTCGGCACAAGGACGTTTCCGGGGAGAGAAGCCTTCTGCTCTTGCCGGAGTTGGAGCGGTGGAGGAGCGACATCGAAGCTTCCCTATTGGACTCGCAAGTGTTGGAGAGGTTGGCCTCCATTGATACCACAAGCATGGACCGATTTGGGCCCTTCATTTCTTGAGCACGTTGCCGCCAATCCCTTGGAGGCCCAACACCAAGAGAGAGAAATTGAGAAGTGCACTGCTGCTTCTGAGGAAGTTCATCCCTCAACAGCTGCTGAGGAAGTGCATCCCTCAACAGCTGCCGAGGTCCAAAAGGTTAGGAGGGAATGCGATTCTGTGGAGTTGCAATATTTGTCTAAGGATTCTCTACTTAATTCGTTGGAAGTGAATGAGACACCGATTGAAGAACAGAGTAGAGATGCAGATGTACCTTGCCCGCATGTTATTAATAACAATGACCCTGATCTGATGGAAAAGGATCTAACTTCTGTCCCTCGTAATGATTACCATAGGCCAAGTTTAATGGAAAGAAATAGTACCACTCCTATTTCTGAGTGGAATGATTCGATAGACGGCTTGGAGGGTGGAACATCTGATCATGCAATTAGATGTCATTTGCCTAGCCCCAAGGGGACAAAAGTTTCTCCATTGACAAAGTATAAACCAACAAAAATTACAAGGAGTAGAAAAACGAAAAGATGGAGTCAGTTGGAAGAGGAGACTCGAAAGACTGCTGTAGACAAGTTTGGCAGGGGAAAATGGAAGTTAATGCTAGATTCTAACAAAGATATATTCAAAGAGAGAACTGAAGTTGATTTGAATGACAAGTGGAGAAGCATGACAAGGTACGGGTGCAAATGA 867 0.4556 TGYGAVGFGTRTFPGREAFCSCRSWSGGGATSKLPYWTRKCWRGWPPLIPQAWTDLGPSFLEHVAANPLEAQHQEREIEKCTAASEEVHPSTAAEEVHPSTAAEVQKVRRECDSVELQYLSKDSLLNSLEVNETPIEEQSRDADVPCPHVINNNDPDLMEKDLTSVPRNDYHRPSLMERNSTTPISEWNDSIDGLEGGTSDHAIRCHLPSPKGTKVSPLTKYKPTKITRSRKTKRWSQLEEETRKTAVDKFGRGKWKLMLDSNKDIFKERTEVDLNDKWRSMTRYGCK* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0406 288 Gene3D - 236 288 - -
Gso8g0406 288 CDD SANT_TRF 234 284 - -
Gso8g0406 288 ProSiteProfiles Myb-like domain profile. 228 283 IPR001005 -
Gso8g0406 288 PANTHER MYB TRANSCRIPTION FACTOR 48 285 - -
Gso8g0406 288 MobiDBLite consensus disorder prediction 165 187 - -
Gso8g0406 288 PANTHER MYB TRANSCRIPTION FACTOR 48 285 - -
Gso8g0406 288 SUPERFAMILY Homeodomain-like 230 284 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0406 Gso-Chr8 3761881 3764059 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0406 196 282 Single Myb Histone (SMH) Gene Family AT1G15720 36.782 6.13e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0406 - K11111 gsj:114424740 608.986