Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0405 ATGGCTGCCACCTTGGAACCTGAGAAAAAAAGCCTTCTCAGACACCACTCCGAGAAGCACTTCACCGCCGGCGAAATCGTCCGCGACATCATCATCGGCGTTTCCGATGGCCTTACCGTCCCCTTCGCCCTCGCTGCCGGACTCTCCGGAGCCAATGCCACCTCCTCCATTGTTCTCACCGCCGGCATAGCCGAAGTCGCCGCCGGCGCCATCTCCATGGGTCTCGGCGGTTATTTGGCAGCAAAAAGTGAATCTGATCACTACGCTAGAGAATTGAAAAGAGAGCAAGAGGAAATCATCGCCGTGCCAGATACTGAAGCGGCAGAGGTAGCAGAAATAATGGCTCAGTATGGAATAGAGGCACATGAATATGCACCCGTGGTGAGTGCTCTCAGAAAAAACCCTCAAGCATGGCTTGATTTCATGATGAAATTTGAGCTGGGACTAGAGAAGCCAGATCCAAGGAGAGCATTGCATAGTGCAATGACGATTGCCATTGCTTACATATTGGGTGGGGTTGTTCCTCTCCTTCCTTACATGTTCATTCCAAAGGCAGCAGAGGCAGTTGTGTTTTCAGTTCTTGTTACTTTGGTTGCACTGCTGATTTTTGGCTATGCCAAAGGGCACTTCACGGGCAATAAACCATTCAGGAGTGCTTTGGAAACAGCTCTAATTGGCGCCATCGCCTCTGCAGCTGCGTTTGGTTTGGCAAAGGCTTTCCATCCATAG 729 0.5103 MAATLEPEKKSLLRHHSEKHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANATSSIVLTAGIAEVAAGAISMGLGGYLAAKSESDHYARELKREQEEIIAVPDTEAAEVAEIMAQYGIEAHEYAPVVSALRKNPQAWLDFMMKFELGLEKPDPRRALHSAMTIAIAYILGGVVPLLPYMFIPKAAEAVVFSVLVTLVALLIFGYAKGHFTGNKPFRSALETALIGAIASAAAFGLAKAFHP* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0405 242 Coils Coil 78 98 - -
Gso8g0405 242 Pfam VIT family 27 237 IPR008217 GO:0005384|GO:0030026
Gso8g0405 242 PANTHER VACUOLAR IRON TRANSPORTER 1.1-LIKE 8 240 - -
Gso8g0405 242 CDD CCC1 6 240 - -
Gso8g0405 242 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 8 240 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0405 Gso-Chr8 3757086 3759449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0405 5 238 Nodulin-like Gene Family AT3G43660 24.153 1.01e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0405 K22736 - gmx:100814227 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g2052 5 43498515 43501188 Gso8g0405 8 3757086 3759449 GST