Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0398 ATGCAGGCTATTAAACATGGGGCTTGTGATTATTGGAAAAAGCCTTTGCATGAGGATCAATTTAGGAATATGTGGATGCATGTTGCTAGGAAAGCCTGGAATGCGAATAGAGTAGATATGAAATCTGGCAGCTTGGAAGAAAAGCCCCAAGCAAATAAGGGGAAATCCCGTGTAATATGGGCAGAAGAAGAACGGCATATCAAATTTCTCGACGCTGCAGAGCAACTTGGGGGGATTGACAAGGCTGCGCCAAAAAGAATTCTTGAAGTGATGAAAGACCCTGGTTTGACAAGAGAGCAAGTTGCTAGTCATTTGCAGAAAGTTAGACATCAGGAGAAGAAGAAGAAGAATAATTCTGATGAGGTGAGGAAGTCATTGCCAAACACGTTTCAATTAACTACAACAGAATCCAGTGTAAGTGCCTATGGAAAAATTGAGCGTCAAGCTTTTGCTGTTAATGGCCTTGTTCCTTGTAAAACACACACAGGCATTGGTACGGAACTTACAAGTGACTTGATGCCAAAAGAGGAGCAATGGCATGCGAAACAAGGCATGACATATGATCATCCAGCTCTGTCAATTTGTCCTCCTCCTCACATTCTCAATCATCATCAGTCCATGATGAATGTAGATGAAGAATCTGGATATGGGGTATGGTCTCCATCAGCTATACATGATACCATGAGACTGAGGCAGGTGCAAGAGCAGGAGCAGCAGCAAATGCAGATGAACTTCCAGTCACCTTGCATCTTCCACGATTATACTACTACTCCAGCATCAGCATCAGCATCAGCATCAGCATCAGCATCTTCCATTCCAGAGCAGGTGCAGGGTGGATATTTTTCTGTTCCAAATACACTCATTTCCCCATATAGCTCTAGATCCGATGATTCAATCCACGAGGAGTCTCCTGAGAACTTTGGATATGATGACGAATCATCATCAAACTAA 951 0.4311 MQAIKHGACDYWKKPLHEDQFRNMWMHVARKAWNANRVDMKSGSLEEKPQANKGKSRVIWAEEERHIKFLDAAEQLGGIDKAAPKRILEVMKDPGLTREQVASHLQKVRHQEKKKKNNSDEVRKSLPNTFQLTTTESSVSAYGKIERQAFAVNGLVPCKTHTGIGTELTSDLMPKEEQWHAKQGMTYDHPALSICPPPHILNHHQSMMNVDEESGYGVWSPSAIHDTMRLRQVQEQEQQQMQMNFQSPCIFHDYTTTPASASASASASASSIPEQVQGGYFSVPNTLISPYSSRSDDSIHEESPENFGYDDESSSN* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0398 316 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 1 247 - -
Gso8g0398 316 MobiDBLite consensus disorder prediction 106 127 - -
Gso8g0398 316 Gene3D - 52 115 - -
Gso8g0398 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 52 113 IPR017930 -
Gso8g0398 316 MobiDBLite consensus disorder prediction 106 122 - -
Gso8g0398 316 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 247 IPR045279 GO:0009736
Gso8g0398 316 SUPERFAMILY Homeodomain-like 54 113 IPR009057 -
Gso8g0398 316 MobiDBLite consensus disorder prediction 291 316 - -
Gso8g0398 316 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 55 110 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0398 Gso-Chr8 3707799 3709246 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0398 1 114 Response Regulator Gene Family AT2G01760 36.250 6.91e-21 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso8g0398 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0398 - K14491 gsj:114421586 617.846