Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0392 ATGGCGGAGACCGTGGCAGTTTCCGGATGCGGCTTTGGCGGTCGTGGACGCGGCGGCGACAGGGGACGAGGGTGGCGCAGGACAGCAGGGCGCCGTGGCGAGGAGGAGGAGTGGGTACCAGTGACAAAGCTAGGACGCCTGGTGAAGGAGGGTAAAATCCGTAGCCTGGAGCAAATCTACCTACACTCGCTCCCAATCAAGGAATACCAAATCATCGACACCTTCGTGGGGCCCACCCTGAAGGACGAGGTGATGAAGATCATGCCCGTCCAGAAACTCTCTGTTATTCCTGTCAGGAGAGGGTATTGGGGTAACAAGATCGGAAAGCCCCACAACGTTCCTTTCAAGGTTACCGGCAAGTGTGGTTCTGTTACCGTTCGCATGGTCCCCGCTCCTCGTGGGTCCGGAATTGTTGCTATTAGGGTTCCAAAGAAGGTCTTGCAGTTCGCTGGAATCGATGGTGTCTTCACTTCCTCAAGGGGTTCCACCAAAACCCTCGGAAATTTCGTCAAGGCTACTTTTGACTGTTTGCTGAAAAGCTACGGTTTTCTAACACTGGAGTTCTGGAAGGAGACTCGGTTCTCCAAATCACCATTCCAAGAGTACACAGATCTATTGGCAAAGCCAACAGGAAAGGCCCTGATCCTCGAGGAGGAAAGGGTGGAGGCTTGA 672 0.5417 MAETVAVSGCGFGGRGRGGDRGRGWRRTAGRRGEEEEWVPVTKLGRLVKEGKIRSLEQIYLHSLPIKEYQIIDTFVGPTLKDEVMKIMPVQKLSVIPVRRGYWGNKIGKPHNVPFKVTGKCGSVTVRMVPAPRGSGIVAIRVPKKVLQFAGIDGVFTSSRGSTKTLGNFVKATFDCLLKSYGFLTLEFWKETRFSKSPFQEYTDLLAKPTGKALILEEERVEA* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0392 223 Gene3D - 99 191 IPR014721 -
Gso8g0392 223 PANTHER RIBOSOMAL S SUBUNIT 92 221 IPR000851 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Gso8g0392 223 PANTHER RIBOSOMAL S SUBUNIT 9 92 IPR000851 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Gso8g0392 223 MobiDBLite consensus disorder prediction 1 32 - -
Gso8g0392 223 PANTHER 40S RIBOSOMAL PROTEIN S2-1-RELATED 9 92 - -
Gso8g0392 223 PANTHER 40S RIBOSOMAL PROTEIN S2-1-RELATED 92 221 - -
Gso8g0392 223 Pfam Ribosomal protein S5, C-terminal domain 119 191 IPR005324 GO:0003735|GO:0005840|GO:0006412
Gso8g0392 223 Gene3D - 37 98 - -
Gso8g0392 223 SUPERFAMILY Ribosomal protein S5 domain 2-like 111 191 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0392 Gso-Chr8 3676370 3678411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0392 34 211 Cytoplasmic Ribosomal Protein Gene Family AT3G57490 69.507 1.53e-104 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0392 K02981 - gmx:100797105 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g2042 5 43421306 43423314 Gso8g0392 8 3676370 3678411 GST