Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0391 ATGTCATCGCCAAACTCCGCCCGTCAGCCCCACGCGCCGCTCCTTCTCCCGCGCCCCGATGCCGCCGCCCGCCTCCCCGTCCTGGCGCTCCTCCTCGGCCGCCGCGGCCACTCCGTCATGGTCCGGGAGACGGCGGCGCGTGAGCTGGAGGAGCGGCGCGCCGACTGGACCTACTCGAAGCCGGTGGTGGCGCTGGACATGACGTGGAACATGGCCTTCGTCGTGGTCTCGGCGGTCATGCTCGCCTGCACCGTCAAGGAGAACCCCAACACGCCGATCCGCTGGTGGATCTGCGGCTACGCGCTGCAGTGCCTCCTCCACGTGGCCCTCGTGTGGCTCGAGTACCGTAGGAGGAACGACGCGCCCGGGGACGAGGATTCTGCTGCCAACCTAGATTACGACGACGTCAACGACAGCGACGAGGACGATGTTGGAACCTCTGGGAGTTCCTCTTCCACCGGATTCACAAAACGATGTGCATCATTGAATACCATGATTTCATTACTTTGGTGGATGGTGGGCTTTTACTGGGTTGTCTCTGGTGGTGATATTCTTCTGCAAGATGCTCCACGTTTATACTGGTTGACTGTTGTCTTTCTAGCATTTGATGTCTTCTTTGCTATCTTTTGTGTTGTTTTGGCATGCTTGATTGGAATTGCCCTCTGTTGTTGTTTGCCCTGTATTATTGCTATTCTCTATGCTGTTGCAGGACAGGAGGGTGCATCAGAATCGGATCTCAGTATACTTCCAAAATACAGATTTCAAATGTTAAGCAATGAGGAAACACCTGGTGAGGGAGGGGGAGGATCAATGATTCCTATGGAGACCAGCAATGGTTACTCGGTGAATGAACGAACACTTTCACCTGAGGATGCAGAATGCTGTATATGCATCTCTTCCTATGAGGATGGAGCTGAACTTCACGTTCTCCCTTGTAACCATCATTTCCACTCTACGTGCATAGTGAAATGGTTAAAGATGAATGCAACTTGTCCTCTTTGCAAGTACAATATTCTCAAGGGAAATGAACAGATAATATCAAGACATGAAAAAATAGAACCTCTCCCAATTTGCTCGGTTTAG 1083 0.5254 MSSPNSARQPHAPLLLPRPDAAARLPVLALLLGRRGHSVMVRETAARELEERRADWTYSKPVVALDMTWNMAFVVVSAVMLACTVKENPNTPIRWWICGYALQCLLHVALVWLEYRRRNDAPGDEDSAANLDYDDVNDSDEDDVGTSGSSSSTGFTKRCASLNTMISLLWWMVGFYWVVSGGDILLQDAPRLYWLTVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASESDLSILPKYRFQMLSNEETPGEGGGGSMIPMETSNGYSVNERTLSPEDAECCICISSYEDGAELHVLPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQIISRHEKIEPLPICSV* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0391 360 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 272 340 IPR013083 -
Gso8g0391 360 SUPERFAMILY RING/U-box 285 340 - -
Gso8g0391 360 CDD RING-H2_PA-TM-RING 293 335 - -
Gso8g0391 360 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 345 - -
Gso8g0391 360 Pfam Ring finger domain 293 335 IPR001841 -
Gso8g0391 360 PANTHER TARGET OF ERK KINASE MPK-1 1 345 - -
Gso8g0391 360 MobiDBLite consensus disorder prediction 127 142 - -
Gso8g0391 360 MobiDBLite consensus disorder prediction 126 155 - -
Gso8g0391 360 ProSiteProfiles Zinc finger RING-type profile. 294 335 IPR001841 -
Gso8g0391 360 SMART ring_2 294 334 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0391 Gso-Chr8 3670632 3674587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0391 1 344 C3H Transcription Factor Family AT1G68070 67.330 5.60e-167 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0391 - K13148 gmx:100805848 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g2041 5 43416103 43419948 Gso8g0391 8 3670632 3674587 GST