Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0383 ATGTACACATCAAGGAAGAAAATCCACAAGGATAAGGATGCTGAACCAACTGAGTTTGAAGAGTCAGTTGGACAGGCATTGTTTGATCTGGAAAATACCAACCAGGAGCTTAAAAGTGATCTGAAGGATTTATACATAAACTCAGCTGTGCAAGTTGATGTTTCTGGGAACCGCAAGGCTGTTGTTATTCATGTCCCTTACAGATTAAGGAAAGGTTTCCGTAAGATTCATGTCAGGCTTGTCAGGGAGCTTGAGAAAAAGTTTAGTGGCAAGGATGTAATCTTGGTTGCCACCCGAAGGATTTTGAGGCCACCAAAGAAGGGTTCTGCTGCTCAGCGTCCTCGTAGTCGCACTCTTACTGCTGTTCATGAAGCAATGCTGGAGGATGTTGTATTGCCTGCTGAGATTGTTGGGAAGCGTGTGAGGTTCCGAATTGATGGATCCAAGATTATGAAGGTTTACTTGGACCCAAAGGAGCGAAACAACACTGAGTACAAGTTGGAGACTTTTGCTGCAGTGTACAGGAAGCTATCTGGAAAAGATGTTGTGTTCGAGTATCCTGTCTCAGAGGCTTAG 576 0.4427 MYTSRKKIHKDKDAEPTEFEESVGQALFDLENTNQELKSDLKDLYINSAVQVDVSGNRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILVATRRILRPPKKGSAAQRPRSRTLTAVHEAMLEDVVLPAEIVGKRVRFRIDGSKIMKVYLDPKERNNTEYKLETFAAVYRKLSGKDVVFEYPVSEA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0383 191 Coils Coil 27 47 - -
Gso8g0383 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Gso8g0383 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Gso8g0383 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
Gso8g0383 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0383 Gso-Chr8 3614904 3616854 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0383 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 80.105 5.24e-114 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0383 K02993 - gmx:100527680 374.015