Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0374 ATGGCTGCAGACTTCGCCATTAAAATCCCTACAAGCTTTCCATCAACAATGAACACTCGTTCCTCCTTGTTTGCATCCATACTCACACTTGCTTTCTTCTTCTTAACAAGTTTGCCACAATCCTACTCTCAATTACAAAACCACAAGTACTCTATTTGCAGCCAAATATCATTCAGTTGTGGAACTCTGAGAAACATATCCTATCCTTTCTGGGGAGGGAACCGACCTCAGTTTTGTGGCCGCAATGGGTTCAAGCTAACGTGCATGCACAATGAAAACACCTCGGTTCAAGTTGGTTCCCAAAGATTCAACGTACTAAACATTAACCAAACGGCTTCCACCTTGAGAATGGTGAGAACGGACCTTGTCTATGATCGCTGCTCTTCCAATTTCACCAACACTTCTCTGAGTGTCAGTCCCTTCACTTTTCTCCCCTCCGTTCAGAATGTCATTGTATTCTACAAATGCCCTTCTGGGATTAATTCAGTTGTGGGAAACACTTTTACGTGCCAGAATGATACTAGTAAACATGTTTTCTATGTGGTCAATGGAACTCAGCTGAACCAGTTCCCAGACCTTCACAAGTACTGTGGGGTTAGTCTTCAGGTGCAAGTTTCCCAGGGTGTTGTTTGGGAAAGTGGACTTGGGGTGCTGGAGAAAGGGTTTGATGTGCGGTACGATGCAAAGTTGAGTTCTCAGTGCACTGCATGCAGGGATTCTGGAGGAACATGTGGAACCAATGAGAATGATTCGCCTCAGTTCTCTTGTTATTGCTCCGCTGGAGCTCATGCTTCAGTCTGCTCTACTCACAAAAATCAAAGGAAGAACAGAGTGTTGAAGCTGGTTTTAGGTTTCGTTGCTACTGGATTTGCACTACCTCTAATAGCTGTCATCATATGCCGTAACAAAGCTAGGATTTGGAAATTTATGTTAATACAAGTTGGTAAGATAAAAAGGAATGATCGAGTTATAGAAGCCTTCCTTGAAAGCCAAGGTTCTATGGGTCTAAAAAGATACAGTTTCTCTGATGTCAAGAAAATGACTGACTCCTTGAAAATTAAACTTGGAGAAGGTGGTTATGGTTCTGTATACAAAGGAAAATTACTGAATGGCTGCTCAGTGGCAGTGAAGATACTGAACGAGTCAAAAGAGAATGGCGAAGAGTTTATCAATGAGGTTGCTAGCATAAGCAAAACATCCCATGTCAACATTGTCTCTCTCCTTGGATTTTGTCTAGATGGAAGCAGAAAAGCTCTCATCTATGAGTTCATGTTCAATGGTTCACTTGAAAAGTACATTCACAAGAAAGCATCAGCTGAAAGCAAAACTACTACCCCATCCTTGAGCTTGGAGAGATTGCACCAGATTGCAATAGGCATAGCTCAAGGACTTGAGTACTTGCACAAAGGATGCAACACTCGGATTCTGCATTTCGACATTAAGCCACATAACATCCTTTTGGACGAAGTTTATCGCCCCAAGATATCGGATTTTGGACTTGCTAAGCTCAGCACAAGAGATGAAAGCATCATTTCAATGTCAAATGCTAGAGGGACAGTAGGGTACGTGGCTCCCGAAGTGTTCAGTAAAAGTTTTGGAGGTGTTTCACACAAGTCTGATGTTTACAGCTATGGAATGATGCTGCTAGAAATGGTTGGAGGGCAGAAGAACATGGACATTGAAGCTAGTCGTTCAAGTGAGATATATTTCCCACAATTGGTTATTTATAAGAAGCTTGAGCAGGGCAATGATTTGGGACTGGATGGTGGGATATTGTCCGGTGAGGAAAATGAGATAGCAAAGAGAATGACTATGGTGGGTTTGTGGTGCATTCAGACAATTCCTTCTCATAGACCTACCATAAGTAGAGTCATTGACATGTTGGAAGGTAGTGTGGATTCCTTGGAAATGCCACCAAAACCATTTCTGTCTTCTCCTCCAAGATCATCAACAGATTTTTCCACTGCAATATCCAAATCACTTGACGGTGTCTAA 1995 0.4231 MAADFAIKIPTSFPSTMNTRSSLFASILTLAFFFLTSLPQSYSQLQNHKYSICSQISFSCGTLRNISYPFWGGNRPQFCGRNGFKLTCMHNENTSVQVGSQRFNVLNINQTASTLRMVRTDLVYDRCSSNFTNTSLSVSPFTFLPSVQNVIVFYKCPSGINSVVGNTFTCQNDTSKHVFYVVNGTQLNQFPDLHKYCGVSLQVQVSQGVVWESGLGVLEKGFDVRYDAKLSSQCTACRDSGGTCGTNENDSPQFSCYCSAGAHASVCSTHKNQRKNRVLKLVLGFVATGFALPLIAVIICRNKARIWKFMLIQVGKIKRNDRVIEAFLESQGSMGLKRYSFSDVKKMTDSLKIKLGEGGYGSVYKGKLLNGCSVAVKILNESKENGEEFINEVASISKTSHVNIVSLLGFCLDGSRKALIYEFMFNGSLEKYIHKKASAESKTTTPSLSLERLHQIAIGIAQGLEYLHKGCNTRILHFDIKPHNILLDEVYRPKISDFGLAKLSTRDESIISMSNARGTVGYVAPEVFSKSFGGVSHKSDVYSYGMMLLEMVGGQKNMDIEASRSSEIYFPQLVIYKKLEQGNDLGLDGGILSGEENEIAKRMTMVGLWCIQTIPSHRPTISRVIDMLEGSVDSLEMPPKPFLSSPPRSSTDFSTAISKSLDGV* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0374 664 SUPERFAMILY Protein kinase-like (PK-like) 330 629 IPR011009 -
Gso8g0374 664 ProSiteProfiles Protein kinase domain profile. 349 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0374 664 ProSitePatterns Protein kinases ATP-binding region signature. 355 377 IPR017441 GO:0005524
Gso8g0374 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Gso8g0374 664 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED 9 664 - -
Gso8g0374 664 MobiDBLite consensus disorder prediction 638 664 - -
Gso8g0374 664 Pfam Wall-associated receptor kinase galacturonan-binding 53 118 IPR025287 GO:0030247
Gso8g0374 664 Pfam Wall-associated receptor kinase C-terminal 170 260 IPR032872 -
Gso8g0374 664 PANTHER RUST RESISTANCE KINASE LR10-RELATED 9 664 IPR045874 GO:0004672
Gso8g0374 664 Gene3D Phosphorylase Kinase; domain 1 325 423 - -
Gso8g0374 664 Pfam Protein kinase domain 354 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0374 664 Gene3D Transferase(Phosphotransferase) domain 1 424 637 - -
Gso8g0374 664 SMART serkin_6 349 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0374 Gso-Chr8 3533530 3537520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0374 32 641 Receptor kinase-like Gene Family AT5G38260 39.744 2.06e-143 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gso8g0374 Pkinase 6.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0374 - - gmx:100781427 1313.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g0374 8 3533530 3537520 Gso7g0809 7 8901504 8907107 PCT
Gso7g0808 7 8896485 8900179 Gso8g0374 8 3533530 3537520 PCT