Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0370 ATGAGAACCCAACGTCTTAACCATCTCCTTCTCTCCCTCTTCCTCTTCGCAGCCGCATTCTCCAGCCTTCACCCGACGGCCACCGCCGGAGACGAAGGCGCACCCTCCCCAGGCGACGGCGACGGCGACGCCGATTTCATACGCACTAGCTGCAACACCACGCTCTACCCGGACGTGTGCTTCACCTCCCTCTCTCGCTACGCCAGTGCGGTGCAACAGAACCCCGGCCAGCTGGCGCGCGTTGCCATCTCCGTGAGCCTCTCCAAGGTCCACCGCGCCGCCTCCTACGTCTCCAACCTCACGCGCGACGCCGACTACGACGGCAGCACGCGCGCCGCCCTCGCTCTCCACGACTGCTTCTCGAACCTCGGCGACGCCGTGGACGAAATCCGCGGCTCGCTGAAGCAGATGCGTCAGATTGGAGCCGCCGGCGCCGGCGCCAGCTCGTTCCTGTTTCAGATGAGCAACGTGCAGACGTGGATGAGCGCTGCACTCACCGACGAAGAAACCTGTACGGACGGCTTCCAGGACGTAGCGGACTGTCCCGTGAAAACGGATGTATGCGATCGCGTCACCAACGTCAAGAAGTTCACCAGCAATGCCTTGGCGCTCGTCAACTCCTACGCTAACAAGGGAATGCCTTGA 645 0.6295 MRTQRLNHLLLSLFLFAAAFSSLHPTATAGDEGAPSPGDGDGDADFIRTSCNTTLYPDVCFTSLSRYASAVQQNPGQLARVAISVSLSKVHRAASYVSNLTRDADYDGSTRAALALHDCFSNLGDAVDEIRGSLKQMRQIGAAGAGASSFLFQMSNVQTWMSAALTDEETCTDGFQDVADCPVKTDVCDRVTNVKKFTSNALALVNSYANKGMP* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0370 214 SMART PMEI_2 42 204 IPR006501 GO:0004857
Gso8g0370 214 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 208 IPR035513 -
Gso8g0370 214 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 8 211 - -
Gso8g0370 214 CDD PMEI-like_3 49 210 - -
Gso8g0370 214 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 211 - -
Gso8g0370 214 TIGRFAM PME_inhib: pectinesterase inhibitor domain 16 208 IPR006501 GO:0004857
Gso8g0370 214 Pfam Plant invertase/pectin methylesterase inhibitor 45 204 IPR006501 GO:0004857
Gso8g0370 214 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 208 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0370 Gso-Chr8 3480608 3481830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0370 46 207 Carbohydrate Esterase AT1G53830 26.829 3.31e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0370 - - gmx:100812251 385.571