Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0332 ATGATGATGATGATGAAGAAGAAGGACGCAGCATACTCCTCCATTCTCACACTACTCCTCATTGCCACACTACTCTCCCTAACCGTGTCTGCCTCTTCACTCTCCGACGCCGAAGCAATGTACGTCAAACAACGCCAGCTTCTCTACTACCGAGACGAGTTCGGCGACCGAGGTGAGAATGTCATCGTTGACCCTTCTCTTGCTTTCGAAAATGACCGTCTCAGAAACGCTTATATAGCCTTGCAAGCTTGGAAGCAAGCCATTTTGTCTGATCCCCGTAACCAGACAGCCGATTGGGTTGGATCCGACGTGTGCAGTTACACCGGAGTTTACTGTGCTCCCGCTCTGGACATCCCCAAGATCCGTACCGTTGCCGGCATTGATCTCAACCATTGCGACATTGCCGGCTATTTACCCGAAGAGCTTGGCTTGCTTCTGGATCTTGCACTCTTCCACGTCAACTCCAATAGATTCTGCGGCACCGTGCCGCACAAGTTCGAGAGGTTGAAACTGCTCTACGAACTGGATCTCAGTAACAACAGGTTCGCAGGGAACTTCCCTGAGGTCGTTCTGCGTCTTCCATCACTCAAGTTCTTGGATCTCAGGTTCAACGAATTCGAAGGAACGGTGCCGAGAGAGTTGTTCGATAAGGATCTGGACGCCATTTTCATCAACGACAACCGTTTCGTATTTGATCTTCCGGACAACTTCGGCAACTCGCCGGTCTCCGTCATCGTCCTCGCCAACAACAGGTTCCACGGCTGCATTCCGGCGAGCTTGGGGAACATGTCCAACTTGAACGAGATCATTTTGATGAACAACGCATTCCGATCGTGCTTGCCTTCGGAGATTGGGCTTTTGAAGAACCTGACGGTGTTCGACGTCAGCTTTAATCAGCTTCTTGGTCCCATACCGAACGCCGTTGGAAACGCCGTTAGCTTGGAGCAGCTCAATGTGGCGCATAACTTGCTCTCTGGTCAAATTCCAGCTAGCATTTGTATGTTGCCTCACCTTCAGAACTTCACTTATTCCTTTAACTTCTTCACCGGTGAGCCTCCCGCATGTCTCGCATTGCCGGCGTTTGATGACAGGGTAAACTGCTTACCGGCGAGGCCTCTGCAGAGGCCTCCGGCGCAATGTAAGTCGTTCTTGTCTAAACCTGTGGACTGTAACTCCTTTAAGTGTAAACATTTTGTTCCTTCACCTCCATCACCTTCACCATTTCCTTCACCTACAGCACCGGTAACACCTTCTCCATCACCTTCTACGCCTTCACCATTTCCTTCACCTACAACACCGGTAACACCTTCACCCTCACATTCCCCTCCATCACCTGCTACACCTTCACCATTTCCTTCACCTACAACACCGGTAACACCTTCACCCTCACATTCCCCTCCGTCACCTGCTACACCTACAACACCGGTAACACCTTCACCTTCACATTCCCCTCCGTCACCTGCTACACCTTCACCATTTCCTTCACCTACAACACCGGTAACACCTTCACCTTCACATTCCCCTCCGTCACCTGCTACACCTTCACCATTTCCTTCACCTACAACTCCTGTAACACCTTCACCTCCATCGCCTTCTACTCCTTCACCCTTTCCTTCACCTACGACACCTGTGACACCTTCACCTGTTCATAGTCCTCCTTCTCCAGTGTATTTGCCACCGCCACATTCTTCCCCTACACCACCTGCTCATAATTACGGCTCTCCGCCACCCCATCACTCACCCGCTCAACCTGTTTATCCTTATTTATCACCGCCACCTCCTCCCTCTGTCCATTCTTCACCTCCACCACCACCACCACCACCTTGTATAGAACTTCCTCCACCCCCTCCCCAATCTACACCTTCTCCCACACCTTACCTGCCACCACCATCCCCATCTCCTCCCCCGCCACCGCCACCGGTATACCATTCTCCACCGCCGGCATCACCGCCTCCGTGCGAAACTCCACCTTCAGTTTCTCCGCCTCCACCACCTGCCCCAGTATACGAAGGGCCATTACCACCTATCGTTGGACTCCCATACGCGTCGCCTCCACCACCACCCTTTTATTGA 2073 0.5219 MMMMMKKKDAAYSSILTLLLIATLLSLTVSASSLSDAEAMYVKQRQLLYYRDEFGDRGENVIVDPSLAFENDRLRNAYIALQAWKQAILSDPRNQTADWVGSDVCSYTGVYCAPALDIPKIRTVAGIDLNHCDIAGYLPEELGLLLDLALFHVNSNRFCGTVPHKFERLKLLYELDLSNNRFAGNFPEVVLRLPSLKFLDLRFNEFEGTVPRELFDKDLDAIFINDNRFVFDLPDNFGNSPVSVIVLANNRFHGCIPASLGNMSNLNEIILMNNAFRSCLPSEIGLLKNLTVFDVSFNQLLGPIPNAVGNAVSLEQLNVAHNLLSGQIPASICMLPHLQNFTYSFNFFTGEPPACLALPAFDDRVNCLPARPLQRPPAQCKSFLSKPVDCNSFKCKHFVPSPPSPSPFPSPTAPVTPSPSPSTPSPFPSPTTPVTPSPSHSPPSPATPSPFPSPTTPVTPSPSHSPPSPATPTTPVTPSPSHSPPSPATPSPFPSPTTPVTPSPSHSPPSPATPSPFPSPTTPVTPSPPSPSTPSPFPSPTTPVTPSPVHSPPSPVYLPPPHSSPTPPAHNYGSPPPHHSPAQPVYPYLSPPPPPSVHSSPPPPPPPPCIELPPPPPQSTPSPTPYLPPPSPSPPPPPPPVYHSPPPASPPPCETPPSVSPPPPPAPVYEGPLPPIVGLPYASPPPPPFY* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0332 690 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 27 544 - -
Gso8g0332 690 Gene3D Ribonuclease Inhibitor 241 367 IPR032675 -
Gso8g0332 690 Pfam Leucine rich repeat N-terminal domain 80 112 IPR013210 -
Gso8g0332 690 SUPERFAMILY L domain-like 79 359 - -
Gso8g0332 690 MobiDBLite consensus disorder prediction 404 690 - -
Gso8g0332 690 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 5 27 544 - -
Gso8g0332 690 Gene3D Ribonuclease Inhibitor 76 240 IPR032675 -
Gso8g0332 690 PRINTS Proline rich extensin signature 399 411 - -
Gso8g0332 690 PRINTS Proline rich extensin signature 414 430 - -
Gso8g0332 690 PRINTS Proline rich extensin signature 436 448 - -
Gso8g0332 690 PRINTS Proline rich extensin signature 448 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0332 Gso-Chr8 3111093 3113919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0332 3 395 Trihelix Transcription Factor Family AT4G18670 72.569 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0332 - - gmx:100814585 758.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g0332 8 3111093 3113919 Gso8g0332 8 3111093 3113919 ECH