Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0331 ATGAGTTCCCTCTCTAATAACTCTAGTAGTAGCCACGGCAATTCCTTCCTCCAGATGCCCCCCATCAAGTTTACCAAGCTCTTCATCAATGGAGATTTCGTTGATTCCTTATCTGGAAGGACATTTGAGACTATAGACCCCAGAACAGAAGAGGTAATTGCAAGAGTTAGTGAGGGAGACAAAGAAGATATTGATATTGCTGTTAAAGCAGCACGTCAGGCATTTGACTCAGGTCCATGGCCTCGCTTGCCCGCCTCTGAAAGGGCAAAAATTATGATGAAATGGGCAGACCTAATTGATGAAAACATAGAAGAACTAGCAGCATTAGATACCGTGGATGCTGGCAAGCTGAACTATATTAATAAGGTTGTGGAAATTCCTTCAGCTACAAATGCGTTACGATACTATGCAGGTGCGGCTGATAAAATTCATGGTGAAGTATTAAAAATGAATGGGGATTTTCATGCATATACACTTTTGGAACCAATTGGTGTTGTGGGACACATAATTCCATGGAATGCCCCCAGCCTCTCGTTTTTCATCAAGGTTAGCCCTTCCTTAGCTGCAGGCTGCACCATGGTCCTCAAACCTGCTGAACAAACACCCCTCTCTGCCTTGTTTTATGCTCATCTAGCTAAGTTGGCTGGAATCCCAGATGGTGTGCTTAATATAGTACCTGGATTTGGCCCAACCGCTGGTGCAGCAATAAGCTCACACATGGACATAGATGTGGTCAGTTTTACTGGTTCAATTGAAGTAGGGCGTGAAGTGATGCAGGCTGCAGCTAGGAGCAATTTAAAACCAGTTTCACTTGAATTAGGAGGCAAGTCTCCTCTCATTATTTTCAATGACGCGGATATAGACAAAGCTGCCCAGCTTGCTCTCTTTGGCATCATGTCTAACAAGGGAGAAATTTGTGTGGCAAGTTCTCGGGTGTTTGTCCAGGAAGAGATCTATGATGAATTTGAGAAGAAGTTGGTGGAGAAGGCAAAATCTTGGGTCGTTGGGGATCCTTTTGATCCCAAATCCCTGCAAGGGCCTCAGGCTGACAGGAACCAATTGGAGAAAATACTCTCCTATATTGAACACGGAAAGAGAGAAGGAGCTACCCTTTTGACCGGAGGTAATACAGTGGGCAACAAAGGTTACTACATAGAACCTACAATTTTCTGTAATGTAAAGGAGGACATGCTTATAGCACGAGATGAAATATTTGGCCCTGTACTAGCGCTGATGAAATTTAAGACCATGGAGGAAGCAATTAAAAGTGCTAACAACACCAAGTATGGCCTAGCAGCAGGAATTGTGACCAAGAATTTGGATACTGCAAACACTATGTCAAGGTCCATTCGTGCAGGCATTGTTTGGATCAACTGCTATTTAACCGTAGGGAGTGACGTTCCTTTTGGAGGGTATAAGATGAGTGGATTTGGAAGAGATTTGGGATTGCAGGCCCTTCATAAGTACTTACAAGTTAAATCTGTTGTAACACCTATTCACAATTCTCCTTGGCTTTGA 1518 0.4348 MSSLSNNSSSSHGNSFLQMPPIKFTKLFINGDFVDSLSGRTFETIDPRTEEVIARVSEGDKEDIDIAVKAARQAFDSGPWPRLPASERAKIMMKWADLIDENIEELAALDTVDAGKLNYINKVVEIPSATNALRYYAGAADKIHGEVLKMNGDFHAYTLLEPIGVVGHIIPWNAPSLSFFIKVSPSLAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPDGVLNIVPGFGPTAGAAISSHMDIDVVSFTGSIEVGREVMQAAARSNLKPVSLELGGKSPLIIFNDADIDKAAQLALFGIMSNKGEICVASSRVFVQEEIYDEFEKKLVEKAKSWVVGDPFDPKSLQGPQADRNQLEKILSYIEHGKREGATLLTGGNTVGNKGYYIEPTIFCNVKEDMLIARDEIFGPVLALMKFKTMEEAIKSANNTKYGLAAGIVTKNLDTANTMSRSIRAGIVWINCYLTVGSDVPFGGYKMSGFGRDLGLQALHKYLQVKSVVTPIHNSPWL* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0331 505 SUPERFAMILY ALDH-like 17 500 IPR016161 GO:0016491
Gso8g0331 505 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 29 493 IPR016162 GO:0016491
Gso8g0331 505 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 275 464 IPR016163 GO:0016620
Gso8g0331 505 Pfam Aldehyde dehydrogenase family 34 495 IPR015590 GO:0016491
Gso8g0331 505 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 271 278 IPR029510 GO:0016491
Gso8g0331 505 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 4 505 - -
Gso8g0331 505 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE RF2C 4 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0331 Gso-Chr8 3099919 3104869 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0331 8 505 Aldehyde Dehydrogenase Gene Family AT3G24503 68.938 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0331 K12355 - gmx:100779993 991.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1973 5 42846343 42851966 Gso8g0331 8 3099919 3104869 GST
Gso8g0331 8 3099919 3104869 Gso7g0755 7 8208932 8215646 PCT
Gso8g0331 8 3099919 3104869 Gso9g1556 9 39846093 39853520 PCT
Gso7g0755 7 8208932 8215646 Gso8g0331 8 3099919 3104869 PCT
Gso9g1556 9 39846093 39853520 Gso8g0331 8 3099919 3104869 PCT