Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0330 ATGACTAGCCTTACTAATGGCGATGCTGGCTCCCTCAACAAGGTCCCCACGATCAAGTTCACCAAGCTCTTCATTAATGGAGACTTCGTTGACTCTCTGTCAGGAAAGACATTTGAGACAATAGATCCAAGAACAGGAGATGTTATAGCGAGGATAAGCGAGGGAGATAAAGAAGACATTGACATTGCTGTTAAAGCAGCACGTCATGCATTTGACAACGGTCCATGGCCTCGCCTTCCCGGCTCTGAGAGAGCAAGAATATTGCTGAAATGGGCAGAAATAATTGAGGAAAACGCAGAAGAACTTGCAGCACTAGATGCGATTGATGCGGGGAAGTTGTACCATATGTGTAGGAATGTGGAAGTTCCAGCAGCGGCAAACACTCTTCGTTACTATGCTGGTGCAGCCGATAAGATTCATGGAGAGGTGTTGAAAATGTCTCGAGAGTTCCATGCCTATACATTACTTGAACCACTTGGTGTTGTGGGACACATTACTCCCTGGAATTTCCCCAATACCATGTTCTACATCAAAGTCGCTCCTTCTTTAGCTGCTGGCTGCACCATGGTCCTCAAGCCTGCTGAGCAAACACCCCTCTCTGCTTTGTTTTCTGCTCATCTTGCTAAATTGGCTGGAATCCCAGATGGAGTGATCAATGTAGTGCCTGGATTTGGCCCAACTGCTGGTGCTGCATTAAGCTCACACATGGATGTTGATAAGGTCAGCTTTACCGGTTCAACACAAACAGGCCGTGTGATAATGCAGGCTGCAGCAAAGAGTAACTTGAAACAAGTTTCACTTGAATTAGGAGGCAAGTCACCCCTCATAATTTTTGATGATGCAGATATAGACAAAGCTACTGAGCTAGCTCTACTAGGCATCCTATATAACAAGGGAGAAGTTTGTGTTGCAAGTTCCCGTGTGTTTGTTCAAGAAGGGATCTATGATGAATTTGAGAAAAAACTGGTGGAGAAGGCAAAAGCTTGGGTCGTTGGGGATCCCTTTGATCCTAAAGTTCAACAAGGCCCTCAGGTTGACAAGGAACAATTTGAAAAAGTTCTTTCATATATTGAGCATGGAAAGAAAGAAGGAGCTACCCTTTTGACCGGGGGTAAAACAGTGGGGAACAAGGGCTACTTTATTGAGCCGACAATTTTCTCCAATATAAGGGAGGATATGCTTATAGCACAGGATGAAATATTTGGCCCAGTGATGGCACTGAAGAAGTTTAAGACCACTGAGGAAGCAATTAAGAGTGCTAACAATACCAAGTATGGCCTAGCAGCAGGCATAGTGACCAAGAATTTGGATACAGCAAACACAGTGTCAAGGTCTATTCGGGCAGGCACTATATGGATCAACTGCTATTTTGCCTTTGGCGATGATGTTCCCTTTGGAGGATATAAGATGAGTGGATTTGGAAAAGATCATGGATTGGAAGCCCTTCACAAGTACCTACAAGTTAAATCTGTTGTTACTCCCCTTTACAATTCTCCCTGGCTTTGA 1506 0.4442 MTSLTNGDAGSLNKVPTIKFTKLFINGDFVDSLSGKTFETIDPRTGDVIARISEGDKEDIDIAVKAARHAFDNGPWPRLPGSERARILLKWAEIIEENAEELAALDAIDAGKLYHMCRNVEVPAAANTLRYYAGAADKIHGEVLKMSREFHAYTLLEPLGVVGHITPWNFPNTMFYIKVAPSLAAGCTMVLKPAEQTPLSALFSAHLAKLAGIPDGVINVVPGFGPTAGAALSSHMDVDKVSFTGSTQTGRVIMQAAAKSNLKQVSLELGGKSPLIIFDDADIDKATELALLGILYNKGEVCVASSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKEQFEKVLSYIEHGKKEGATLLTGGKTVGNKGYFIEPTIFSNIREDMLIAQDEIFGPVMALKKFKTTEEAIKSANNTKYGLAAGIVTKNLDTANTVSRSIRAGTIWINCYFAFGDDVPFGGYKMSGFGKDHGLEALHKYLQVKSVVTPLYNSPWL* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0330 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 271 460 IPR016163 GO:0016620
Gso8g0330 501 SUPERFAMILY ALDH-like 15 497 IPR016161 GO:0016491
Gso8g0330 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 489 IPR016162 GO:0016491
Gso8g0330 501 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 2 501 - -
Gso8g0330 501 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 2 501 - -
Gso8g0330 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 267 274 IPR029510 GO:0016491
Gso8g0330 501 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 295 306 IPR016160 GO:0016491
Gso8g0330 501 Pfam Aldehyde dehydrogenase family 30 491 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0330 Gso-Chr8 3093534 3098501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0330 14 501 Aldehyde Dehydrogenase Gene Family AT3G24503 71.575 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0330 K12355 - gmx:100811540 983.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1972 5 42836529 42841290 Gso8g0330 8 3093534 3098501 GST
Gso8g0330 8 3093534 3098501 Gso7g0754 7 8184051 8188865 PCT
Gso8g0330 8 3093534 3098501 Gso9g1557 9 39865217 39869381 PCT
Gso7g0754 7 8184051 8188865 Gso8g0330 8 3093534 3098501 PCT
Gso9g1557 9 39865217 39869381 Gso8g0330 8 3093534 3098501 PCT