Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0323 ATGGAAAACCATAACCGTCTCAAACTGCGAATCTCTCGCATGTTCCGATCCTCATTCGGGTCGTGCAGAACCCGTAACCTAACCGATGTTATGGAAAAAACGGTGTTTGCACCACCCAGCCCCATCGATGAACCACCCTCACCCAAAACGAGACCCATTTTTAGGCCCAAAACCATCAACGACACTTGCATCCTGTCGTTTAAGGATTCTCATTCTCTCCCCAGACGCAAAATCTCCGAGTGGTCATCACCTTTTGTAGTGGGTGGCGGCAACAAAATCAAAAACAACAACCTCAACCTTAACCTCGGTGTCATGTCGTGCCCACCCACTTCCCCAAACATTTCCCTCAACACAATCCACGAACACGATTTCGGTTACGACGACAAAAAAAAGGTCTCGACGAAAAACTCGAGGACCAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGCATGCCCAGAAGAAAAGGGAGTTTTTCCCTTTCAATTCATGCGCCAAAGACACCAACTTTGGTGGATACTGGTGGTATAGCAGTGACGAAGACGACGAAACCGACACCCTTTTCTCCTCGAAAAGCCTCTCCTCGGATTCCTCCCGGTCCCGGCGCCGGCGCCGGAATAATGAACGGAGCTCCGACATGGGTGTTCTGCCGCTGAACGGGAAGGTGAAGGATACATTCGCGGTGGTGAAGCGCTCCAGCGACCCTTACAGTGATTTCAGGACTTCGATGCTCGAAATGATCGTCGAGAAGCAGATTTTTTCGCCCGCTGATTTGGAGAATCTCTTGCAGTGTTTTCTGTCGCTGAATTCGCATCACCATCATAAGATCATTGTCCATGTCTTCACCGAGATTTGGGAGGCTCTGTTCTCTGACTGGTTTTGA 882 0.4932 MENHNRLKLRISRMFRSSFGSCRTRNLTDVMEKTVFAPPSPIDEPPSPKTRPIFRPKTINDTCILSFKDSHSLPRRKISEWSSPFVVGGGNKIKNNNLNLNLGVMSCPPTSPNISLNTIHEHDFGYDDKKKVSTKNSRTNKKKKKKKKKRHAQKKREFFPFNSCAKDTNFGGYWWYSSDEDDETDTLFSSKSLSSDSSRSRRRRRNNERSSDMGVLPLNGKVKDTFAVVKRSSDPYSDFRTSMLEMIVEKQIFSPADLENLLQCFLSLNSHHHHKIIVHVFTEIWEALFSDWF* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0323 293 MobiDBLite consensus disorder prediction 135 154 - -
Gso8g0323 293 PANTHER TRANSCRIPTION REPRESSOR OFP8-LIKE 4 291 - -
Gso8g0323 293 MobiDBLite consensus disorder prediction 196 210 - -
Gso8g0323 293 ProSiteProfiles OVATE domain profile. 228 287 IPR006458 -
Gso8g0323 293 Pfam Transcriptional repressor, ovate 232 289 IPR006458 -
Gso8g0323 293 MobiDBLite consensus disorder prediction 127 154 - -
Gso8g0323 293 MobiDBLite consensus disorder prediction 188 214 - -
Gso8g0323 293 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 4 291 IPR038933 GO:0045892
Gso8g0323 293 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 226 289 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0323 Gso-Chr8 3035702 3036917 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gso8g0323 Ovate 2.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0323 - - gmx:100776613 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g0323 8 3035702 3036917 Gso8g0323 8 3035702 3036917 ECH
Gso5g1964 5 42776852 42778036 Gso8g0323 8 3035702 3036917 GST