Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0301 ATGGTATTGGTGAGACTGGTTCCCATGGCTTCTTCTTCAATACGACCCGCTCTCTCAACACCTTCCTCCTTTTCTCTCTTCAGCCCTTCTCGCCGTATCTCTTTCTCCCATCTTCCCTCTCCCTCTGTGTCTCAATCCAATAGTTTTGGCCTCAAAGCTTCCAGAGTGTTGAGACAATATGGTAACTCCACGAGAATCATGGCATCAGGGGACTTGTCTCATTCAGTTGCGGCTGCTTCACCAGAAAATGTGCTTGAGTGGGTCAAACAGGACAAGAGAAGAATGCTTCATGTTGTATATCGTGTTGGGGACCTGGACAGGACCATAAAGTTTTATACAGAGTGCCTAGGAATGAAGCTCCTCAGAAAGAGGGACATACCAGAGGAGAAATATACTAATGCCTTTCTTGGATATGGGCCCGAAGACTCACACTTTGTTATTGAACTGACATACAATTATGGAGTTGACAAGTATGATATTGGAACTGGATTTGGCCATTTTGGTATTGCTGTTGATGATGTTGCAAAAGCAGTGGAGCTAATAAGAGCTAAGGGTGGCAAAATAACTAGGGAGCCTGGTCCTGTCAAGGGAGGGCGTTCAGTAATTGCATTTATTGAAGATCCTGATGGTTACAAATTTGAACTTATAGAAAGAGGTCCCACTCCTGAACCCTTGTGCCAAGTAATGCTTCGAGTGGGTGATCTTAATCGTTCAATAGAATTTTACGAGAAGGCATTTGGTATGGAGCTGCTTCGTACACGAGACAATCCAGAATACAAGTACACCATAGCAATGCTGGGTTATGGTCCAGAAGATAAAAGCACTGTTCTGGAGTTGACTTACAATTATGGAGTCACTGAATACGATAAAGGAAATGCTTATGCTCAGATTGCAATAGGCACAGATGATGTGTACAAAACTGCAGAAGCAATTAAACTAGCTGGAGGAAAGATTACTCGGGAACCTGGACCATTACCTGGTATCAACACAAAAATTACTGCATGCTTGGATCCAGATGGCTGGAAGTCGGTTTTTGTAGATAATGTTGATTTTCTAAAGGAGTTGGAATAG 1071 0.4304 MVLVRLVPMASSSIRPALSTPSSFSLFSPSRRISFSHLPSPSVSQSNSFGLKASRVLRQYGNSTRIMASGDLSHSVAAASPENVLEWVKQDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKAVELIRAKGGKITREPGPVKGGRSVIAFIEDPDGYKFELIERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPEYKYTIAMLGYGPEDKSTVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLAGGKITREPGPLPGINTKITACLDPDGWKSVFVDNVDFLKELE* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0301 356 Gene3D - 67 219 IPR029068 -
Gso8g0301 356 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 93 223 IPR029068 -
Gso8g0301 356 CDD GlxI_Ni 95 216 - -
Gso8g0301 356 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 225 346 IPR029068 -
Gso8g0301 356 ProSitePatterns Glyoxalase I signature 1. 97 118 IPR018146 GO:0004462|GO:0046872
Gso8g0301 356 Gene3D - 221 356 IPR029068 -
Gso8g0301 356 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 224 348 IPR037523 -
Gso8g0301 356 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 94 218 IPR037523 -
Gso8g0301 356 TIGRFAM glyox_I: lactoylglutathione lyase 82 227 IPR004361 GO:0004462|GO:0046872
Gso8g0301 356 TIGRFAM glyox_I: lactoylglutathione lyase 225 348 IPR004361 GO:0004462|GO:0046872
Gso8g0301 356 CDD GlxI_Ni 225 346 - -
Gso8g0301 356 PANTHER LACTOYLGLUTATHIONE LYASE, CHLOROPLASTIC-RELATED 22 356 - -
Gso8g0301 356 PANTHER LACTOYLGLUTATHIONE LYASE 22 356 - -
Gso8g0301 356 ProSitePatterns Glyoxalase I signature 1. 227 248 IPR018146 GO:0004462|GO:0046872
Gso8g0301 356 ProSitePatterns Glyoxalase I signature 2. 161 173 IPR018146 GO:0004462|GO:0046872
Gso8g0301 356 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 227 342 IPR004360 -
Gso8g0301 356 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 95 215 IPR004360 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0301 Gso-Chr8 2834931 2841284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0301 227 345 Calmodulin-binding Proteins AT1G08110 28.276 1.04e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0301 K01759 - gmx:100775714 702.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g0301 8 2834931 2841284 Gso8g0301 8 2834931 2841284 ECH
Gso5g1944 5 42562740 42567948 Gso8g0301 8 2834931 2841284 GST
Gso8g0301 8 2834931 2841284 Gso9g1597 9 40256545 40260272 PCT
Gso9g1597 9 40256545 40260272 Gso8g0301 8 2834931 2841284 PCT