Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0292 ATGGGTCGTCGTAAGATTGAGATTACGGAGGTGAAGGACTCCAACACCAAGCAAGTTACATTTTCCAAGCGTCGAACAGACAAGTTTCTTAAACAAGAGCCGAAATCAAATGATGTCCAGGGAACATCTATTGAGGTTGCTGATATGGATAGGCTCAATCAACAACTATCCGATGTTCAAAATGAAATACTCGAGGAACAAAAGAAGGCTGCAGAACTCAATGAGAGACTGAAACAAAAAGGAGTCACACAACCTTTTCAAACTAAAGAATTGCAAGGTTCAAATTTAGAGATCCAAAAGATGAAGGACTGTTATGATGCAATCGAGGTGTCAGAATATATGTTGCTCCTTGCAAAAGAACCAGTAGTTGGAATACCCGAACAAGTTGCTACTCAGGAAAGAAGAAGGAATTAA 414 0.3961 MGRRKIEITEVKDSNTKQVTFSKRRTDKFLKQEPKSNDVQGTSIEVADMDRLNQQLSDVQNEILEEQKKAAELNERLKQKGVTQPFQTKELQGSNLEIQKMKDCYDAIEVSEYMLLLAKEPVVGIPEQVATQERRRN* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0292 137 PANTHER MADS BOX PROTEIN 28 128 - -
Gso8g0292 137 PANTHER MADS BOX PROTEIN 2 31 - -
Gso8g0292 137 ProSiteProfiles MADS-box domain profile. 1 31 IPR002100 GO:0003677|GO:0046983
Gso8g0292 137 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL29 2 31 - -
Gso8g0292 137 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL29 28 128 - -
Gso8g0292 137 Coils Coil 49 80 - -
Gso8g0292 137 Coils Coil 129 137 - -
Gso8g0292 137 SUPERFAMILY SRF-like 1 26 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0292 Gso-Chr8 2732331 2733160 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0292 1 31 Type I MADS-box Gene Family AT3G66656 67.742 7.90e-07 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0292 - - gmx:100804079 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1935 5 42483222 42483877 Gso8g0292 8 2732331 2733160 GST