Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0288 ATGGACGAGGACGAGCAACTCGAACGATTCGACTCGGAGTTCGCCTCCACGAGTTCCATTTCCTCCACCCTCAGCACCGACGATTTCCGCAACCTCACCAGCTCCGGCGACATTTCCTCCATCAGCAGCGGCTCCGGCGAGATTCCTCCCGTCGCGGTCCTCGCGCCTCCGTTTCTCTACCGCGAGGGGTCCAATGACGTCGAGACGGCGCCGGCGCCCAGGGAGAAGTGCGTGGGAAGGAGTAACAAGGGAGTGAGCTGGGGGCACACTTCTGTGATTGGGAGAAGGAAAGAGATGGAGGACGCCATCGCCGTTATTCCGGGATTCATGTCTCGCACGTGCGATCGCGTCGGGGGTTGTACGGCTCCCGGTTCTAGATCCTCCGGCGAGATCGCTCCGCTTCATTTCTTCGGCGTTTACGACGGCCACGGTGGCTCTCAGGTGGCTAAGTTTTGTGCGAAGCGGATGCACGATGTTATAGCAGAGGAATGGGACCGAGAAATAGGAGGTGCCGCTGAATGGCAGAGAAGATGGGAAGCTGTATTTGCTAACAGTTTTGAGAGGACTGATAATGAAATCCTCTCAGACGCAGTTGCACCAGAAATGGTAGGATCTACTGCCTCTGTGGTGGTTCTATCTGGTTGCCAAATTATTACATCCAACTGCGGCGACTCAAGGGTAGTTCTTTGCCGCAGGACACAAACTATCCCCTTGACAGTGGATCAGAAGCCGGATAGACAAGATGAACTCTTGAGAATTGAAGGAGGAGGAGGAAAAGTCATAAACTGGAATGGAGCTAGGGTATTTGGTGTTCTTGCCATGTCCAGGGCCATAGGTGATCGGTACTTGAGACCGTGGATTATTCCGGTGCCAGAGATAACTTTCACAGCAAGAACCGATGAGGATGAGTGCTTAGTTTTGGCAAGTGATGGACTCTGGGATGTAATGACCAATGAAGAGGTTGGAGAAGTAGCACGCCGCATTCTTAGAAGGCGTCGCAGATCCTTGTCAATGGAGGAAACATCTCCTGCACAAGTTGTTGCCGAAAGCTTGACTGAAATTGCATATGGTCGAAATAGTAAAGATAACATTTCAATCATAGTTGTTGATCTGAAATCAAAGAGAAAACGTCAGCAAAGGCCTCCTTTAATTTCCTAA 1158 0.5155 MDEDEQLERFDSEFASTSSISSTLSTDDFRNLTSSGDISSISSGSGEIPPVAVLAPPFLYREGSNDVETAPAPREKCVGRSNKGVSWGHTSVIGRRKEMEDAIAVIPGFMSRTCDRVGGCTAPGSRSSGEIAPLHFFGVYDGHGGSQVAKFCAKRMHDVIAEEWDREIGGAAEWQRRWEAVFANSFERTDNEILSDAVAPEMVGSTASVVVLSGCQIITSNCGDSRVVLCRRTQTIPLTVDQKPDRQDELLRIEGGGGKVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPEITFTARTDEDECLVLASDGLWDVMTNEEVGEVARRILRRRRRSLSMEETSPAQVVAESLTEIAYGRNSKDNISIIVVDLKSKRKRQQRPPLIS* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0288 385 Pfam Protein phosphatase 2C 94 364 IPR001932 -
Gso8g0288 385 MobiDBLite consensus disorder prediction 12 28 - -
Gso8g0288 385 Gene3D - 76 381 IPR036457 -
Gso8g0288 385 ProSiteProfiles PPM-type phosphatase domain profile. 86 371 IPR001932 -
Gso8g0288 385 PANTHER ALPHABET, ISOFORM E-RELATED 64 380 - -
Gso8g0288 385 SMART PP2C_SIG_2 115 371 IPR001932 -
Gso8g0288 385 SMART PP2C_4 76 369 IPR001932 -
Gso8g0288 385 CDD PP2Cc 88 371 IPR001932 -
Gso8g0288 385 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 64 380 - -
Gso8g0288 385 SUPERFAMILY PP2C-like 78 372 IPR036457 -
Gso8g0288 385 MobiDBLite consensus disorder prediction 1 28 - -
Gso8g0288 385 ProSitePatterns PPM-type phosphatase domain signature. 136 144 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0288 Gso-Chr8 2712197 2718321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0288 87 381 PP2C-type Phosphatase Gene Family AT4G26080 50.476 2.88e-100 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0288 K14497 - gmx:100793293 730.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g0288 8 2712197 2718321 Gso8g0288 8 2712197 2718321 ECH
Gso5g1933 5 42455865 42464985 Gso8g0288 8 2712197 2718321 GST