Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0281 ATGGGTAGAGCCATCAGGTGGTTGAAGGGGTTGTTTGGGATAAGGACAGACAGAGAGCGCAAAGAAAATTCAAATCACTCAGACAGAGATTCCCGAGGTCTATGTCATAATCCAACCACCATTCCACCCAATATTTCACCTGCAGAGGCCGCTTGGCTTCAATCCTTCTACTCAGAAACTGAGAAGGAGCAGAATAAGCATGCTATTGCAGTTGCTGCAGCCACTGCAGCAGCCGCAGATGCCGCAGTGGCTGCAGCACAGGCCGCCGTGGCAGTGGTTAGACTAACCAGCCACGGCAACAGCAGAGACACCACGTTTGGTGGTGCTGGACAAGAAAGGTTGGCTGTTGTCAAGATTCAAACCGTGTTTAGAGGATATTTGGCAAGGAAGGCATTGAGAGCCTTAAAAGGATTGGTCAAGTTACAAGCACTTGTGAGAGGGTACTTAGTGCGGAAGCAGGCAGCAGCAACCCTGCATAGTATGCAGGCTCTAATTAGAGCTCAAGCAACAGTAAGGTCTAAGAAATCTCGCAATGAAGCTCATAGGTTTCAAACACAAGCGCGAAGATCCATGGAGAGATTTGATGACATAAAGAGTGTGTACATAGCTCCCATCCAAAGCAGAAGGCTATCATCTTCTTTTGATGCCACAATGAACAATGCAAACAGTGTTGATGGGAGCCCCAAAATAGTGGAAGTGGACACTGGCAGTGGCAGGCCAAAGTCAAGGTCTCGCAGGAGCAACACCTCAATGTCAGATTTTGGTGATGACCCATCATCATTCCAGGCACTTCCTTCTCCTCTCCCATTTGCTCATTTGTCCATACCAAACCTCAGGAATTACCACAACTCAGAGTGGGGCTTAACAGGAGAAGAGTGCAGATTCTCCACAGCACAAAGCACTCCACGCTTCACCACCAACTCTTGTAGTTGTGGAGGATCTGTTGTTGTTGCTGCACCTACGAATATGAGTATGAGTATGACACCTAAAAGTGTTTGCACCGAGAACAACTTCTTCTATGGGCAGTATCATGACAATTTTCCAAACTACATGGCCAGCACTCAGTCTTTCAAGGCCAAACTGAGGTCTCATAGTGCTCCAAAGCAACGCCCCGATCCAGCTGGGCCAAAGAAGAGGCTTACCCTCAACGAGATGATGGAGTCTAGGTGTAGTTTAAGTGGGACTAGAATGCAAAGGTCTTGCTCTCAGATTCAAGAAGCTATCAGTTTTAAGAATGCTGTCATGAGTAAGCTTCAGAAGTCTGCAGAAATTGGAAGGGACACAGAATTGAACTTTTCCAACCAAAGGAGGTGGTGA 1317 0.473 MGRAIRWLKGLFGIRTDRERKENSNHSDRDSRGLCHNPTTIPPNISPAEAAWLQSFYSETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGNSRDTTFGGAGQERLAVVKIQTVFRGYLARKALRALKGLVKLQALVRGYLVRKQAAATLHSMQALIRAQATVRSKKSRNEAHRFQTQARRSMERFDDIKSVYIAPIQSRRLSSSFDATMNNANSVDGSPKIVEVDTGSGRPKSRSRRSNTSMSDFGDDPSSFQALPSPLPFAHLSIPNLRNYHNSEWGLTGEECRFSTAQSTPRFTTNSCSCGGSVVVAAPTNMSMSMTPKSVCTENNFFYGQYHDNFPNYMASTQSFKAKLRSHSAPKQRPDPAGPKKRLTLNEMMESRCSLSGTRMQRSCSQIQEAISFKNAVMSKLQKSAEIGRDTELNFSNQRRW* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0281 438 MobiDBLite consensus disorder prediction 18 33 - -
Gso8g0281 438 Pfam Protein of unknown function (DUF4005) 326 396 IPR025064 -
Gso8g0281 438 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Gso8g0281 438 MobiDBLite consensus disorder prediction 242 258 - -
Gso8g0281 438 MobiDBLite consensus disorder prediction 219 258 - -
Gso8g0281 438 Gene3D - 111 154 - -
Gso8g0281 438 MobiDBLite consensus disorder prediction 358 379 - -
Gso8g0281 438 MobiDBLite consensus disorder prediction 18 38 - -
Gso8g0281 438 PANTHER IQ-DOMAIN 5-RELATED 1 422 - -
Gso8g0281 438 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
Gso8g0281 438 Pfam IQ calmodulin-binding motif 115 133 IPR000048 GO:0005515
Gso8g0281 438 Pfam IQ calmodulin-binding motif 139 153 IPR000048 GO:0005515
Gso8g0281 438 SMART iq_5 134 155 IPR000048 GO:0005515
Gso8g0281 438 SMART iq_5 111 133 IPR000048 GO:0005515
Gso8g0281 438 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0281 Gso-Chr8 2647853 2650549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0281 1 397 IQD Protein Family AT3G16490 50.750 5.82e-90 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0281 - - gmx:100800892 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g0281 8 2647853 2650549 Gso8g0281 8 2647853 2650549 ECH
Gso5g1926 5 42394229 42397028 Gso8g0281 8 2647853 2650549 GST