Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0261 ATGGTGGAGGCCAAGGGTAGGAAAGAGGAGGTCGTCACTCGAGAGTTCACCATCAACCTCCACAAACGCTTGCATGGCTGCACATTCAAGAAGAAGGCTCCTAAAGCAATTAAGGAGATAAGGAAGTTTGCTCAGAAAGCGATGGGGACGAATGATGTGAGAGTGGATGTGAAGCTGAACAAGGCTGTGTGGAGCCAGGGGATTCGGAGCGTCCCGAGGAGGATTAGGGTTCGCATTGCCCGAAAGAGGAACGACGATGAGGATGCAAAGGAAGAGCTATATTCCCTTGTTACTGTTGTCGAAATCCCCAAGGATGAGCTCAAAGGTTTGGGAACCAAGGTTATTGATGATGAAGATTGA 360 0.4917 MVEAKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTNDVRVDVKLNKAVWSQGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVVEIPKDELKGLGTKVIDDED* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0261 119 SUPERFAMILY Ribosomal protein L31e 10 91 IPR023621 -
Gso8g0261 119 Pfam Ribosomal protein L31e 10 91 IPR000054 GO:0003735|GO:0005840|GO:0006412
Gso8g0261 119 Gene3D - 8 119 IPR023621 -
Gso8g0261 119 PANTHER 60S RIBOSOMAL PROTEIN L31-2-RELATED 1 119 - -
Gso8g0261 119 CDD Ribosomal_L31e 8 91 IPR000054 GO:0003735|GO:0005840|GO:0006412
Gso8g0261 119 PANTHER 60S RIBOSOMAL PROTEIN L31 1 119 IPR000054 GO:0003735|GO:0005840|GO:0006412
Gso8g0261 119 SMART Ribosomal_L31e_2 9 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Gso8g0261 119 ProSitePatterns Ribosomal protein L31e signature. 53 67 IPR020052 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0261 Gso-Chr8 2464878 2465834 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0261 1 119 Cytoplasmic Ribosomal Protein Gene Family AT4G26230 79.832 7.59e-68 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0261 K02910 - gmx:100499742 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g0261 8 2464878 2465834 Gso8g0261 8 2464878 2465834 ECH
Gso5g1904 5 42221973 42222984 Gso8g0261 8 2464878 2465834 GST