Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0256 ATGGACAATATATCAAAGCCAGAGGTAATATTGCAGAGTGAGGGGTTACTGAAGTATATATTGGAGACCGGCGTTTACCCGCGAGAAGCGGAGATCCTCAAAGAGCTAAGAAATGCAACTGCAGAGCATCCTCTGGGTTTCATGGGTGCTGCACCTGATGCGGGGCAGCTAATGGCCATGCTCTTGAAGCTTTTAAATGCTAAAAAGACAATTGAAGTGGGAGTTTTTACTGGATACTCTCTTCTCCTCACTGCACTCACCATTCCTAATGATGGAAAGATTATAGCTATGGATCCAGACAGAAAAGCTTATGAGATAGGACTGCCATTTATTAAAAAGGCTGGTGTGGAACACAAGATTGACTTCATAGAGTGTCCAGCTTTACCGGTCCTTGATAAACTCTTAGAAGAACCTGCAAATGAAGGGAGTTTTGACTTTGCCTTCATTGATGCTGACAAAAACAATTACTGGAATTACCACGAGAGGCTTATAAAATTGGTGAAGATTGGTGGTTTAGTAGCGTACGATAACACGCTGTGGGGAGGAACTGTTGCCTTGCCTGAAAAGGCAGTTTCGGAACCGAAACGAGAATGGAGACGATTATCACTTGCTTTTAACAAAGCCATTTCCAAGGATTGTCGTGTTCAAATTGCTTTTCTTTCAATAGGTGACGGAGTCATTATCTGCATGCGTGTTCGCTGA 702 0.4302 MDNISKPEVILQSEGLLKYILETGVYPREAEILKELRNATAEHPLGFMGAAPDAGQLMAMLLKLLNAKKTIEVGVFTGYSLLLTALTIPNDGKIIAMDPDRKAYEIGLPFIKKAGVEHKIDFIECPALPVLDKLLEEPANEGSFDFAFIDADKNNYWNYHERLIKLVKIGGLVAYDNTLWGGTVALPEKAVSEPKREWRRLSLAFNKAISKDCRVQIAFLSIGDGVIICMRVR* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0256 233 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 9 232 IPR002935 GO:0008171
Gso8g0256 233 PANTHER PROTEIN, PUTATIVE-RELATED 1 233 - -
Gso8g0256 233 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 231 IPR029063 -
Gso8g0256 233 CDD AdoMet_MTases 71 175 - -
Gso8g0256 233 PANTHER O-METHYLTRANSFERASE-RELATED 1 233 - -
Gso8g0256 233 Gene3D Vaccinia Virus protein VP39 2 233 IPR029063 -
Gso8g0256 233 Pfam O-methyltransferase 25 231 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0256 Gso-Chr8 2441567 2442943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0256 10 232 Monolignol Biosynthesis Gene Families AT4G26220 65.471 1.77e-108 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0256 K00588 - gmx:100795229 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g0256 8 2441567 2442943 Gso8g0256 8 2441567 2442943 ECH
Gso5g1901 5 42201409 42203101 Gso8g0256 8 2441567 2442943 GST