Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0251 ATGAGCAGCCAAAAGGGTCGTCATGAACATGAAGAAGAGATGGGTACCGGTAAAGTGGTTGTGGTTGCAGTAAAAGCTTCTAGAGATATTTCAAGGAATGCTTTGGTGTGGGCTTTGACTCATGTTGTTCAGCCAGGGGATTGCATTAAGCTGTTGGTTCTCATTCCGCCTCTTTCCTCAAGCAAGAGGGTATGGGGACTTTCAAGATTTACTACTGATTGTGCCTCGAGTCATTGGAGATCCAGTTTAGGAACTATTTCAGATCAGAAAGAAGTTATTACAGATTCCTGTTCTCAATTAGTACTTCAACTCCATGATTTTTATGATCCCGAGAAGATAAAAATCAGAGTGAAGATTCTTTCTGGTTCTTTATCCGGAGCTGTTGCTGCTGAAGCCAAGAGAGTCCAGTCAAGCTGGGTTATATTGGACAAAAAATTGAAGCTTGAAAAGAAAGACTGCATGGAGCAGCTGCATTGCAATATTGTAATTATGAAGCGGTCTAGGCCAAAGATTCTGCGCTTGAATTTGAACAGTTCGTCTAAGATGGAACTAAACATGGCTTGTCCATTGGCACTTTCAAACTTCAAAGACAACTCTGAACATGCAGATATAATTAGAGGTCCAGCTGTTACTCCTGCTAGTAGTCCTGAGCAAGGGTCACCACTACTGACTGCAACTGATATTGGAACATCATCCATATCGAGCTCAGACCCTGCAACTTCACCATTTTTCCACTCCGACAATCATGAAAGACAAAGGAGAGGTTTTACCTTTGTTCACGAGGGACTGACAAACCTGGAGGATATTGAGTCTGACTCTGAGAGTGAAAAGCTAAGTATGTCATCCAAGAGCTCATATTTTCAGCCATGGATTGCAAATGTAATTTGCATGGATGGTGATTACTCAAAACATGAGAACATGCAAAGATCTAGTGACAAGACTTTAGCTACTGCCTATGAAACTTTGCTTCAGAAATTCTCAAAGTTGGATCAGGATCCTATCCTAGGGATGCTCAATTGTAAACTTGATGTGAACTTAAGCAAAAGTGTTAGAGAAGCAATTTCACTATCTAAAACTTCAGCTCCTGGACCTCCCCCATTGTGCTCCATTTGTCAGCACAAGGCTCCTGTGTTTGGCAATCCACCAAGGTGGTTTACATTTGCTGAATTGCAACTTGCCACAGGTGGTTTTTCGCAAGCAAACTTCTTGGCAGAAGGTGGTTTTGGTTCTGTACACCGCGGTGTCCTGCCTGATGGGCAAGTAATTGCTGTCAAGCAGTATAAATTAGCCAGTACTCAAGGAGATAAAGAGTTTTGCTCAGAAGTAGAGGTCTTAAGCTGTGCACAACATCGCAATGTTGTGATGTTAATTGGGTTTTGTGTGGAGGATGGAAGGAGATTGCTAGTTTATGAGTACATCTGCAATGGCTCTCTGGATTCTCATATCTACAGACGAAAGGAGAGCGTACTGGAATGGTCTGCTAGGCAAAAGATTGCAGTTGGAGCAGCTCGTGGCTTGAGATACCTTCACGAAGAATGTAGAGTGGGTTGTATTGTGCACCGTGACATGCGGCCTAACAATATTCTCCTCACTCATGATTTTGAAGCTTTAGTAGGAGATTTTGGACTAGCAAGGTGGCAGCCAGATGGAGACATGGGTGTGGAAACCAGGGTCATAGGAACATTTGGGTATTTGGCGCCAGAATATGCTCAAAGTGGTCAAATTACTGAAAAAGCTGACGTGTACTCGTTTGGGATAGTATTACTGGAGCTTGTCACAGGACGGAAAGCAGTGGATATAAATCGGCCCAAGGGCCAGCAATGCCTAAGTGAATGGGCACGCCCATTGCTTGAAAAACAAGCTACTTATAAACTAATAGATCCGAGCTTAAGGAACTGCTATGTTGATCAAGAGGTTTATCGCATGCTGAAATGTTCCTCTTTGTGCATCGGACGGGATCCTCATTTAAGGCCAAGAATGTCTCAGGTGCTCAGGATGCTGGAAGGTGACATTCTCATGTGA 2022 0.4327 MSSQKGRHEHEEEMGTGKVVVVAVKASRDISRNALVWALTHVVQPGDCIKLLVLIPPLSSSKRVWGLSRFTTDCASSHWRSSLGTISDQKEVITDSCSQLVLQLHDFYDPEKIKIRVKILSGSLSGAVAAEAKRVQSSWVILDKKLKLEKKDCMEQLHCNIVIMKRSRPKILRLNLNSSSKMELNMACPLALSNFKDNSEHADIIRGPAVTPASSPEQGSPLLTATDIGTSSISSSDPATSPFFHSDNHERQRRGFTFVHEGLTNLEDIESDSESEKLSMSSKSSYFQPWIANVICMDGDYSKHENMQRSSDKTLATAYETLLQKFSKLDQDPILGMLNCKLDVNLSKSVREAISLSKTSAPGPPPLCSICQHKAPVFGNPPRWFTFAELQLATGGFSQANFLAEGGFGSVHRGVLPDGQVIAVKQYKLASTQGDKEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHIYRRKESVLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEALVGDFGLARWQPDGDMGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGIVLLELVTGRKAVDINRPKGQQCLSEWARPLLEKQATYKLIDPSLRNCYVDQEVYRMLKCSSLCIGRDPHLRPRMSQVLRMLEGDILM* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0251 673 SUPERFAMILY Protein kinase-like (PK-like) 377 668 IPR011009 -
Gso8g0251 673 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 15 673 - -
Gso8g0251 673 ProSitePatterns Tyrosine protein kinases specific active-site signature. 518 530 IPR008266 GO:0004672|GO:0006468
Gso8g0251 673 Pfam Protein tyrosine and serine/threonine kinase 401 667 IPR001245 GO:0004672|GO:0006468
Gso8g0251 673 CDD STKc_IRAK 403 669 - -
Gso8g0251 673 Gene3D Phosphorylase Kinase; domain 1 369 472 - -
Gso8g0251 673 ProSiteProfiles Protein kinase domain profile. 397 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0251 673 PANTHER OS01G0253100 PROTEIN 15 673 IPR045271 GO:0004714|GO:0006468
Gso8g0251 673 MobiDBLite consensus disorder prediction 213 243 - -
Gso8g0251 673 Gene3D Transferase(Phosphotransferase) domain 1 473 671 - -
Gso8g0251 673 MobiDBLite consensus disorder prediction 210 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0251 Gso-Chr8 2379204 2383317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0251 372 663 Trihelix Transcription Factor Family AT1G68690 52.027 9.48e-99 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Gso8g0251 PK_Tyr_Ser-Thr 6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0251 - - gmx:100819546 1318.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g0251 8 2379204 2383317 Gso8g0251 8 2379204 2383317 ECH
Gso5g1894 5 42136358 42140808 Gso8g0251 8 2379204 2383317 GST