Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0238 ATGGAAGACTATGATAGTTACATAGCGCAGAGTGGTAGGGGAGAAAATGGATTGACAGTGGCATCGCGTGCTTGTTCGCGCGACGAATTTCGCCCACGTGGCGGAAAAGTACTATCGCGTGTTGCTGCTGTTGCGGCTGCAAGAAACGGTTCTTCGACTTCAAGATATGATATGGCTGTGACGAGTAATGTTAAGAAAAAGCAAAAACGTAAGGGCCTTCAGGAGCTGTTTACAACCGATTACATTGTGAACAGCGTGTTACGGAAGGATGGTCCTCCACTTGGTCAGGAATTTGATTTTCTTCCTTCTGGACCCAAATATTTCATTTCTGCTTGTGAAGAGGACCAAGGGTCCTCCAAAAGGAGGAAGGTTCCCAACAGTGCAACTCGAAGTCTCGCTGATTGTAATATGAAAGCACCTGTGAAGAAACATGGTATTGGCAAAGGTCTGATGACAGTTTGGAGGGCAACAAATCCTGATATTGGAGACCTTCCATTTGGTTTTGGCGTTTCTGGCCAAGAAGTTCCTCTAATCTCAAATTCTACAGGACCGAAACCAGTCCGTGAGAACAGGTCATGGAAAACAGTAAACAGGAATGGAACGCCAAAAAGTAAAATGCAGAATAAGAGAAATAAATCGCAGGATAAGAGGAAACTTACCATGCAAAGAAGAGTGGGGGACTTGAACCTAAATGTGACTCAGAATCAGTCACCAAAGGAAAAATGTGAACTAGCTTTGGATAGTGCAATATCTGAGGAGGGAGTTGATCGAATTTCAGTGTTATTTGATGATGAAGAGCTAGAGCTGAGGGAGTTACAAGAAGGAACCAATCTGTTTATGTGTTGTGATCATCTTGCTGCCGGTGGAATGGTTGGCTGCTCACTTTGTAAAGATGTGCTAGTGAAGTTTCCGCCAGATATTGTCAAGATGAAGAAACCTATCCATTTGCAACCTTGGGACTCATCTCCAGAAATTGTGAAGAAATTATTTAAGGTTTTCCACTTCATTTATACATATGCTATAATTGTTGATATTTGCCCCTTCACCCTTGATGAGTTTGTTCAAGCCTTTCATGATAAGGACTCAATGTTACTTGGCAAGATTCATGTGGCCCTTCTCACACTTCTTGTGTCTGACATTGAAGTGGAGCTTACTAATGGGTTTTCACCTCATTTAAATAAATCGTGTAACTTTCTTGCATTGCTTCACTCGGTTGAAAGTCAAGAATATTCCCTGGATTTCTGGAGAAGATCTCTAAATTCTCTTACCTGGATAGAAATACTCCATCAAGTGCTGGTTGCTTCTGGATTTGGTTCAAAACAAGGTTCCTTACGTGGAGAGGTCCTTAACAAGGAATTGAATCTTCTTGTAAACTATGGTCTATGCCCTGGCACCTTGAAGAGTGAGTTGTTTAACATCTTGTCAGAGAGAGGAAACATTGGATGCAAAGTAGCTGAACTGGCAAAGTCAATGCAGATTGCTGAATTAAACCTTGCCAGCACCCCAGAGGAACTCGAGTCTTTAATATGTTCCACGCTTTCAAGTGATATTACTTTATTTGAAAAGATTTCGTCAACTGCATACCGTTTGCGTATGAGCACTGTTATGAAGGATGGTGATGAATCTCATTCAGATACAGAGGACTTTGGTAGTGTTGATGATGAACTTAATGACACTGATACGTGTAGCAGTGGTGACGATTTTGAAAGTGATCCAATAAACTCCAGTATAAGAAAATTGAAGCGTGCAAGCAGTCATAAAAATAATATGCTGAAAGTATACACTGAAATTGATGAGAGCCATCCAGGAGAAGCGTGGCTATTAGGACTGATGGAGAGTGAATATTCGGACTTGAACATTGAAGAAAAATTGAATGCATTGGCGGCTTTAACCGATCTTGTTTCATCTGGATCCAGCATCAGGATGAAGGATTCGACAAAAGTTGCAGCTGATTGCAATTCTAGCATTCAATTACAAGGGTCTGGAGCTAAAATAAAGAGATCAGCAGTAAAGAAACCTGGGCCACTTTGGAACCAGAAATTACACTTGAATTCTGATCCCTGTACAGTCGATTCCTCATCGTTAATCTCAAGACTCCATAGTCGTGAAGCTTCCTTTGAAAAGGGAAAAGGGTCATCTATTTCGCACCCTATTCAATCAGTGTTTTTGGGATCTGATCGTCGGTACAATAGATACTGGCTTTTCTTGGGTCCTTGTAATGTAGATGATCCAGGCCACAGGAGGATATACTTTGAATCTTCTGAAGATGGTCACTGGGAGGTTATTGATACTGAGGAGGCCTTGTGTGCCTTATTGTCGGTTCTGGATGATAGAGGAAATCGGGAGGCTCTTCTTATTGAATCTTTGGAAAGGAGACAAGCATCACTTTGCAGATCTATGTCCAGGATTAATGTTAATAGTACTGGAAAGGGTTCTATGTCACATTCTGATCAATCTGAACTGGATATGGTCACTGATGACAGTTATTCTCCTGCATCTGATGTAGACAACCTGAACCTGACTGAGACTGCTAAAGACTCTCTGCCATCTGCTGGGGCTGTGGTAATTAAAGCTGGAAAGAAAGGAGAGGAACAAATTAAAAAATGGATCCGTGTTCAAGAATATGATACTTGGATTTGGAATTCCTTTTATTCAGATCTCAATGTTGTAAAATATGGTAAAAGGTCTTATCTGGACTCTCTTGCCAGATGTAAGAGTTGTCATGATCTATACTGGAGAGATGAGAGACACTGTAAAATTTGCCATATGACATTTGAGCTAGATTTTGATCTAGAAGAAAGATATGCAATCCACATAGCCACATGCAGGGAGAAAGAAGACAGCAATACATTTCCTAATCATAAAGTGCTACCATCACAGATTCAATCACTGAAAGCTGCAGTTTATGCTATTGAGTCTGTTATGCCTGAAGATGCCCTGGTTGGTGCTTGGAGGAAGTCTGCTCATAAACTGTGGGTGAAACGGCTCAGACGCACCTCAACTTTAGTGGAGCTTTTGCAGGTTCTTGCTGATTTTGTTGGTGCCATCAATAAGGACTGGTTGTTTCAATGCAAATTTCCGCATGGGCTGGTTGAAGAAATCATTGCATCTTTTGCATCTATGCCCCATACATCATCTGCCCTTGCTCTGTGGTTAGTGAAGCTAGATGCCATAATTGCTCCCTACCTGGACAGAGTCCATCTTCAGAAGAAACAGGGAACCAGTCAGCATGGTCCTTGGCGATAG 3246 0.4165 MEDYDSYIAQSGRGENGLTVASRACSRDEFRPRGGKVLSRVAAVAAARNGSSTSRYDMAVTSNVKKKQKRKGLQELFTTDYIVNSVLRKDGPPLGQEFDFLPSGPKYFISACEEDQGSSKRRKVPNSATRSLADCNMKAPVKKHGIGKGLMTVWRATNPDIGDLPFGFGVSGQEVPLISNSTGPKPVRENRSWKTVNRNGTPKSKMQNKRNKSQDKRKLTMQRRVGDLNLNVTQNQSPKEKCELALDSAISEEGVDRISVLFDDEELELRELQEGTNLFMCCDHLAAGGMVGCSLCKDVLVKFPPDIVKMKKPIHLQPWDSSPEIVKKLFKVFHFIYTYAIIVDICPFTLDEFVQAFHDKDSMLLGKIHVALLTLLVSDIEVELTNGFSPHLNKSCNFLALLHSVESQEYSLDFWRRSLNSLTWIEILHQVLVASGFGSKQGSLRGEVLNKELNLLVNYGLCPGTLKSELFNILSERGNIGCKVAELAKSMQIAELNLASTPEELESLICSTLSSDITLFEKISSTAYRLRMSTVMKDGDESHSDTEDFGSVDDELNDTDTCSSGDDFESDPINSSIRKLKRASSHKNNMLKVYTEIDESHPGEAWLLGLMESEYSDLNIEEKLNALAALTDLVSSGSSIRMKDSTKVAADCNSSIQLQGSGAKIKRSAVKKPGPLWNQKLHLNSDPCTVDSSSLISRLHSREASFEKGKGSSISHPIQSVFLGSDRRYNRYWLFLGPCNVDDPGHRRIYFESSEDGHWEVIDTEEALCALLSVLDDRGNREALLIESLERRQASLCRSMSRINVNSTGKGSMSHSDQSELDMVTDDSYSPASDVDNLNLTETAKDSLPSAGAVVIKAGKKGEEQIKKWIRVQEYDTWIWNSFYSDLNVVKYGKRSYLDSLARCKSCHDLYWRDERHCKICHMTFELDFDLEERYAIHIATCREKEDSNTFPNHKVLPSQIQSLKAAVYAIESVMPEDALVGAWRKSAHKLWVKRLRRTSTLVELLQVLADFVGAINKDWLFQCKFPHGLVEEIIASFASMPHTSSALALWLVKLDAIIAPYLDRVHLQKKQGTSQHGPWR* 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0238 1081 MobiDBLite consensus disorder prediction 177 218 - -
Gso8g0238 1081 MobiDBLite consensus disorder prediction 177 207 - -
Gso8g0238 1081 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 54 1072 IPR044977 GO:0006357
Gso8g0238 1081 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 602 641 IPR028942 -
Gso8g0238 1081 SMART testlast3 323 382 IPR018501 -
Gso8g0238 1081 ProSiteProfiles DDT domain profile. 323 382 IPR018501 -
Gso8g0238 1081 PANTHER OS07G0619600 PROTEIN 54 1072 - -
Gso8g0238 1081 Pfam DDT domain 326 379 IPR018501 -
Gso8g0238 1081 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 719 792 IPR028941 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0238 Gso-Chr8 2251209 2259878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0238 243 1059 Homeobox Transcription Factor Family AT1G28420 27.851 3.20e-75 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Gso8g0238 WSD 8.3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0238 - - gmx:100792062 2150.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1883 5 42026496 42035663 Gso8g0238 8 2251209 2259878 GST