Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0233 ATGTCAAGGTTGATTCAAGAGAAGAAGCTAGGTGCAGGACGTGTTGTGGCAGTGGCAATTGAAAACAACAAAACAAGCCAATATGCAGCGAAATGGGCAGTTGACAATCTTCTTCCAAAAGACCAAGCTCTCCTATTGGTCCATGTCAGGCAAAAAGCATCTTCCATTCCTACGCCAACGGGAAACCTTGTATCCCTTGATGGCAACGATGATGTGACCAGAGCATACATGCAACAAATGGACAATGAATCTAAGGAGCTTTTCGCTTCATTTCGTGTCTTCTGCAATAGAAAGAGTATACAATGCAAAGAAATCTTATTGGAGGACATGGATATAAGTAAGGGATTAATAGAAGGTATTTCTAAGTATTCGGTGGAGCTTCTGGTACTCGGGGCAGCTTCAAGGAGTGGTCTTGTGAGAAGATTTAGAATATCTGATATTCCAAGTGCCGTGTCCAAAGGGGCACCACCATTCTGCACTGTGTACATTATTGCCAAAGGAAAAATCTCATCTGTGAAAACTGCAACCGCTCCACTAACTGCTAAACCTTCAACCCGTAACAATACAATGCAGCCGCTGCAGTCTTTCCAAACTCCTGAGAGAATGGATACACAAATAACACGTAACCCCATCCCACCACGATCATCAACGGAGAAGCCATCATACATCGTTCGCCAGCTACCATCAAATGAAGACGAAATCATATCACCATTCACAAGACCAGGTAGAGGAAATTGCAGATACGAGTCCACAATCCCCGACTCTGATATTTCATTCGTGAGCAGTGGAAGGCCAAGTGTTGATAGGCTGTTCCCTTCAATGTATGATGATATGGACTCTGGAATGAACACTAGGCTTTCAACAGGCTCAGATTTTGATGTCAGAAGCTTTGGTTCTTCATTCTCAGGAGCCAAGTCAATTGATCATGGTGACTACTCATTCAGTTCACAAGACAGTGGGACATCGATGTCATCGTCAATGTTTTCAGCTTCGGAGGAAGTGGAAGCTGAAGTGAGGAGACTGAAGCTAGAACTGAAGCAGACAATGGAAATGTACAGTTCTGTATGTAAGGAAGCTACGACAGCAAAGCAAAAGGCACTAGAACTTCAGCGTTGGAAAGTGGAAGAACAAAGGAAATTGGAAGACACACGATTAGCTGAAGGAACAGCATTGGCAATGGCTGAGAGGGAGAAAGTAAAATGTATGGCTGCCATGAAGTCAGCAGAAACATCTCGAAAAATTGCAGAGTTGGAAGCACAAAAGAGAATAAGTGTAGAATCTGAGCATAAGAAGAAGAACGTGGATATCCTTTCACATAGTCCAGTCAGGTACAGAAAATACACCATAGAGGAGATAGAAGAAGCAACAAAATTCTTTTCCAACTCTCTCAAGATCGGCGAAGGTGGTTATGGACCAGTCTACAGGTCTGAACTAGACCACACGCCAGTTGCAATAAAAGTGTTAAAACCAGATGCAGCTCAGGGACGTTCACAGTTTCAGCAGGAGGTTGAAGTGCTAAGTTGCATAAGGCATCCAAACATGGTTCTCCTCCTTGGAGCATGCCCAGAGTTTGGCTGCTTAGTGTATGAGTACATGGCTAATGGAAGTTTGGATGATTGCCTCTTCCGGAGAGGCAACAAACCAGCCCTTCCCTGGCAACTAAGATTCCGAATTGCTGCGGAGATTGCCACCGGACTCCTTTTCCTACACCAGACAAAGCCCGAACCACTGGTGCATCGCGACTTAAAACCGGGAAACATTTTGCTCGACCGTAACTATGTGAGCAAGATCAGTGATGTGGGATTGGCAAGGCTTGTCCCTCCTAAAGTCGCAGACACAGTAACACAGTATCGCATGACATCAACCGCTGGAACTTTCTGTTACATTGACCCTGAGTATCAGCAAACAGGCATGCTGGGAATCAAATCTGATGTTTACTCACTTGGGATCATGCTTCTGCAGATGATAACAGCAAAGCCACCAATGGGTTTGACTCACCATGTTGGAAGATCTATTGAGAACGGGACTTTTGCGGATATGCTTGACCCGGCCGTTGAGGACTGGCCAGTTGAACATGCCTTGCATTTCGCCAAGCTTTCATTGGCATGTGCAGAGATGAGAAGAAAAGATAGACCTGATCTTGGAAAAGTTGTGTTGCCTGAGCTCAATAAACTCAGAGATTTTGCTGATGAAAACATGCCCATGATGATGTTGTTTGGTATGCCCACTGGATTCACTCCCAGAAACAACTACAATTACTCAAACTCCTCCTTTTCCTCAGTTCAAGACTCCATGAGTGAATCCCAGTCGATGTCAGGAATGTCCGGATATGAAAGCCACTCAAGCTCATCGTCAGTAGGGAGAATGTAA 2370 0.4468 MSRLIQEKKLGAGRVVAVAIENNKTSQYAAKWAVDNLLPKDQALLLVHVRQKASSIPTPTGNLVSLDGNDDVTRAYMQQMDNESKELFASFRVFCNRKSIQCKEILLEDMDISKGLIEGISKYSVELLVLGAASRSGLVRRFRISDIPSAVSKGAPPFCTVYIIAKGKISSVKTATAPLTAKPSTRNNTMQPLQSFQTPERMDTQITRNPIPPRSSTEKPSYIVRQLPSNEDEIISPFTRPGRGNCRYESTIPDSDISFVSSGRPSVDRLFPSMYDDMDSGMNTRLSTGSDFDVRSFGSSFSGAKSIDHGDYSFSSQDSGTSMSSSMFSASEEVEAEVRRLKLELKQTMEMYSSVCKEATTAKQKALELQRWKVEEQRKLEDTRLAEGTALAMAEREKVKCMAAMKSAETSRKIAELEAQKRISVESEHKKKNVDILSHSPVRYRKYTIEEIEEATKFFSNSLKIGEGGYGPVYRSELDHTPVAIKVLKPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEFGCLVYEYMANGSLDDCLFRRGNKPALPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPKVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDVYSLGIMLLQMITAKPPMGLTHHVGRSIENGTFADMLDPAVEDWPVEHALHFAKLSLACAEMRRKDRPDLGKVVLPELNKLRDFADENMPMMMLFGMPTGFTPRNNYNYSNSSFSSVQDSMSESQSMSGMSGYESHSSSSSVGRM* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0233 789 SUPERFAMILY Protein kinase-like (PK-like) 435 718 IPR011009 -
Gso8g0233 789 Gene3D Transferase(Phosphotransferase) domain 1 532 736 - -
Gso8g0233 789 SMART serkin_6 459 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0233 789 ProSiteProfiles Protein kinase domain profile. 459 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0233 789 Gene3D HUPs 14 164 IPR014729 -
Gso8g0233 789 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 142 - -
Gso8g0233 789 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 1 789 - -
Gso8g0233 789 MobiDBLite consensus disorder prediction 757 789 - -
Gso8g0233 789 CDD STK_N 15 167 - -
Gso8g0233 789 PANTHER OS02G0152300 PROTEIN 1 789 - -
Gso8g0233 789 Gene3D Phosphorylase Kinase; domain 1 437 531 - -
Gso8g0233 789 MobiDBLite consensus disorder prediction 180 220 - -
Gso8g0233 789 Pfam Universal stress protein family 14 155 IPR006016 -
Gso8g0233 789 Coils Coil 331 351 - -
Gso8g0233 789 ProSitePatterns Serine/Threonine protein kinases active-site signature. 577 589 IPR008271 GO:0004672|GO:0006468
Gso8g0233 789 Pfam Protein kinase domain 462 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0233 Gso-Chr8 2207222 2211125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0233 16 773 Receptor kinase-like Gene Family AT5G35380 54.961 0.0 750
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gso8g0233 Pkinase 7.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0233 - - gmx:100791005 1457.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g0233 8 2207222 2211125 Gso8g0233 8 2207222 2211125 ECH
Gso5g1879 5 41975448 41979489 Gso8g0233 8 2207222 2211125 GST