Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso8g0232 | ATGGCACTAAGCGGTTGGCATTCTTGGATAATACTATTCATCTACCTTTCACCACATCTCATTGTTCTTCCTTCTTTTGGAGCTTCTGACTCTGAATTGCTCCTTAACGTCAAGCAAAACTTGCAAACCAACAATCAACAACTGTCCTCCTGGAACGCTTCGGTTCCTCCTTGTTCCGGTGGCCATTCCAATTGGCGCGGGGTTCTCTGCTACGAAGGAAAAGTGTGGGGCATTAAGCTTGAGAACATGGGGCTCAAAGGGCTCATTGATGTTGACTCTCTCAAGGGCTTGCCTTATCTCAGAACGTTGAGTTTCATGAACAATGATTTCGAGGGTGCATGGCCAGAGATTCAACATTTGATTGGTCTCAAGTCTATTTATCTTTCCAACAACAAGTTTTCTGGGGAGATTCCTTCCAGAACTTTTGAAGGGTTGCAGTGGCTGAAGAAGGTTCATTTGTCCAACAACCATTTCACCGGTGCTGTTCCAACTTCCCTCGTGTTGCTGCCGAGGCTCATAGAGTTGAGGTTGGAGGGAAACAAATTCAATGGCCCCATTCCATATTTTAGTTCCCATAACAAATTGAAATCATTTAGCGTAGCTAATAATGAGTTGAGTGGCCAAATTCCTGCCTCCCTTGGAGCCATGCCAGTTTCTTCCTTTTCTGGTAATGAAAGGTTATGTGGAGGCCCATTGGGAGCATGTAATTCGAAGTCCTCGACATTGAGCATTGTTGTGGCTTTGGTGGTTGTTTGCGTGGCAGTGATTATGATCGCAGCAGTAGTATTATTCAGCCTTCACAGAAGAAGAAAAAATCAAGTGTCAGTAGAGAATCCAGCCTCTGGGTTCGGGGGTAATAAAGGACGTGTGAGGGAATTGGGTAGTGAAAGTATGAGGTCAACAAGGTCAATAAGCTCCAACCACAGCAGAAGAGGGGACCAAATGAAGCTGTCTTTTCTGAGAGATGATAGGCAGAGGTTTGATATGCAAGAGTTGCTCAGAGCCTCTGCTGAGATTTTGGGTAGTGGTTGCTTCAGCTCTTCTTACAAGGCTGCTTTGTTGAATGGCCCAACAATAGTGGTGAAGAGGTTCAAGCAGATGAACAATGTCGGGAAGGAAGAGTTTCAAGAGCACATGAGAAGGATAGGGAGGTTGACCCATCCTAACTTGCTTCCTCCTGTCGCTTACTATTATAGAAAGGAGGAGAAGCTCGTCGTCACAGACTACGTTCAGAATGGTAGCTTGGCTGTTCGCCTTCATGGACACCAATCCATTGGAGAACCAAGCCTTGATTGGCCAATCCGGTTGAAGATAGTGAAAGGCATAGCAAAAGGTCTTGAAAATCTATACAAGGACATGCCAAGCCTAATTGCACCCCATGGAAATCTAAAGTCCTCTAATGTTCTCTTGACTGAATCATTTGAGCCACTTCTCACAGACTATGGCTTAGTCCCAGTGATAAACCAGGATCTGGCTCAGGACATCATGGTGATATACAAGTCTCCTGAGTATTTGCAACAAGGAAGAATCACAAAGAAGACTGATGTGTGGTGTCTTGGAATACTAATTCTTGAGATTCTAACTGGGAAGTTCCCTGCAAACTTCTTGCAAAAAGGTAAAGGGAGTGAGGTGAGTTTGGCAAGTTGGGTGCATTCAGTTGTCCCAGAACAATGGACAAATGATGTGTTTGATCAAGAAATGGGGGCAACAATGAACAGTGAGGGAGAGATGGGGAAGCTTCTCAAGATTGCCTTGAATTGTGTTGAAGGGGATGTGGATAAGAGGTGGGATTTGAAAGAAGCAGTAGAGAAAATCCTGGAGATCAAGCAGAGGGATAATGATCAAGAAGATTTTTTTACTTCTTATGCTAGTGAAGCAGACATGAAGTCTTCAACTTGA | 1899 | 0.4439 | MALSGWHSWIILFIYLSPHLIVLPSFGASDSELLLNVKQNLQTNNQQLSSWNASVPPCSGGHSNWRGVLCYEGKVWGIKLENMGLKGLIDVDSLKGLPYLRTLSFMNNDFEGAWPEIQHLIGLKSIYLSNNKFSGEIPSRTFEGLQWLKKVHLSNNHFTGAVPTSLVLLPRLIELRLEGNKFNGPIPYFSSHNKLKSFSVANNELSGQIPASLGAMPVSSFSGNERLCGGPLGACNSKSSTLSIVVALVVVCVAVIMIAAVVLFSLHRRRKNQVSVENPASGFGGNKGRVRELGSESMRSTRSISSNHSRRGDQMKLSFLRDDRQRFDMQELLRASAEILGSGCFSSSYKAALLNGPTIVVKRFKQMNNVGKEEFQEHMRRIGRLTHPNLLPPVAYYYRKEEKLVVTDYVQNGSLAVRLHGHQSIGEPSLDWPIRLKIVKGIAKGLENLYKDMPSLIAPHGNLKSSNVLLTESFEPLLTDYGLVPVINQDLAQDIMVIYKSPEYLQQGRITKKTDVWCLGILILEILTGKFPANFLQKGKGSEVSLASWVHSVVPEQWTNDVFDQEMGATMNSEGEMGKLLKIALNCVEGDVDKRWDLKEAVEKILEIKQRDNDQEDFFTSYASEADMKSST* | 633 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso8g0232 | 632 | Pfam | Leucine rich repeat N-terminal domain | 29 | 70 | IPR013210 | - | |
Gso8g0232 | 632 | Gene3D | Ribonuclease Inhibitor | 27 | 188 | IPR032675 | - | |
Gso8g0232 | 632 | SUPERFAMILY | L domain-like | 55 | 217 | - | - | |
Gso8g0232 | 632 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 7 | 622 | - | - | |
Gso8g0232 | 632 | ProSiteProfiles | Protein kinase domain profile. | 334 | 619 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso8g0232 | 632 | Pfam | Leucine rich repeat | 122 | 182 | IPR001611 | GO:0005515 | |
Gso8g0232 | 632 | SUPERFAMILY | Protein kinase-like (PK-like) | 338 | 611 | IPR011009 | - | |
Gso8g0232 | 632 | Gene3D | Transferase(Phosphotransferase) domain 1 | 410 | 628 | - | - | |
Gso8g0232 | 632 | Gene3D | Phosphorylase Kinase; domain 1 | 299 | 409 | - | - | |
Gso8g0232 | 632 | MobiDBLite | consensus disorder prediction | 297 | 311 | - | - | |
Gso8g0232 | 632 | Pfam | Protein tyrosine and serine/threonine kinase | 338 | 604 | IPR001245 | GO:0004672|GO:0006468 | |
Gso8g0232 | 632 | Gene3D | Ribonuclease Inhibitor | 192 | 235 | IPR032675 | - | |
Gso8g0232 | 632 | PANTHER | LRR RECEPTOR-LIKE KINASE | 7 | 622 | - | - | |
Gso8g0232 | 632 | MobiDBLite | consensus disorder prediction | 277 | 311 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso8g0232 | Gso-Chr8 | 2202782 | 2205345 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso8g0232 | 24 | 631 | Receptor kinase-like Gene Family | AT5G35390 | 53.774 | 0.0 | 646 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Gso8g0232 | PK_Tyr_Ser-Thr | 1.1e-25 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso8g0232 | - | - | gmx:100790485 | 1213.36 |