Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0207 ATGGACGACACCGAAACCAAAGGAAGAATCGAAGAAACTGTGCGTAGGATTTTGCAAGAATCGGACATGGACGAGGTTACTGAGTCTAAGATTCGAAAACAGGCCTCCGAACACCTTGGCCTCGACCTGTCTCAGCCTTATTTCAAAGCCTTTGTCAAACAGGTCGTGAAGGCTTTTCTCCAAGAAGAAGAACAACGACAGAAACAACAACAACAAGATGAAGATGAAGAAGAAGAACTAGGAGGAGGTTCCAAGGGCAAGGAGTACGATGATGAAGGCGATCTCATCATCTGCAGGCTTTCAGATAAGAGAAGGGTGACGATTCAGGATTTCAGAGGGAAAACATTGGTCTCCATTCGGGAGTATTATAAAAAGGATGGCAAGGAACTTCCTACTTCCAAAGGAATAAGTTTGACAGAAGAGCAGTGGTCAGCCTTTAAGAAAAATGTGCCTGCCATAGAAAAAGCCATTAAGAAAATGGAGTCAAGTTGA 492 0.437 MDDTETKGRIEETVRRILQESDMDEVTESKIRKQASEHLGLDLSQPYFKAFVKQVVKAFLQEEEQRQKQQQQDEDEEEELGGGSKGKEYDDEGDLIICRLSDKRRVTIQDFRGKTLVSIREYYKKDGKELPTSKGISLTEEQWSAFKKNVPAIEKAIKKMESS* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0207 163 Pfam DEK C terminal domain 6 60 IPR014876 -
Gso8g0207 163 Gene3D - 2 63 - -
Gso8g0207 163 Coils Coil 57 80 - -
Gso8g0207 163 PIRSF RNA_polymII_KELP 1 163 IPR017415 -
Gso8g0207 163 Pfam Transcriptional Coactivator p15 (PC4) 98 149 IPR003173 GO:0003677|GO:0006355
Gso8g0207 163 Gene3D Transcriptional Coactivator Pc4; Chain A 86 163 IPR009044 GO:0003677|GO:0006355
Gso8g0207 163 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR KELP 4 162 - -
Gso8g0207 163 SUPERFAMILY ssDNA-binding transcriptional regulator domain 97 159 IPR009044 GO:0003677|GO:0006355
Gso8g0207 163 SUPERFAMILY DEK C-terminal domain 4 61 - -
Gso8g0207 163 MobiDBLite consensus disorder prediction 63 90 - -
Gso8g0207 163 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 4 162 IPR045125 GO:0003713|GO:0060261
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0207 Gso-Chr8 1941172 1943352 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Gso8g0207 DEK_C 7.5e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0207 K25815 - gmx:100499671 279.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1854 5 41736779 41738967 Gso8g0207 8 1941172 1943352 GST