Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0187 ATGGAGAGTGACTTGAGCTGGGAGCGGAACACACTCATCAATGAGCTAATTCAGGGGATGGAGGTAGCAAGGAAGTTGAAGGCTGACTTGAAGTTGCCGTATTCAGTTGACACAAGAGATCTGCTTCTGCAGAGGATATTATCTTCTTACGAAAAGGCTCTACTGATTCTAAGATGCAGCAATGCATCAACTTCCGAGTTGCAGGGCATGAATCAAGCAACACCAACTTTGCTACCCGAGTCCCCATTATCTGTCCATGGAAGTCCTCTGCGCGAGGACGTTCATGGGGCCATCAAGGATCACCATAATTCAAAGAAAAGAAAGATAACGCCCAAATGGATGGATCGTGTAAGAGTGAGCTGTGAGAGTGGTCTTGAAGGACCACATGAAGATGGTTACAACTGGAGAAAATATGGTCAGAAAGACATCCTTGGAGCCAAATATCCCAGAAGTTACTATAGGTGCACCTTCCGCAGCACTCAGGGCTGTTGGGCAACAAAGCAAGTGCAGAGATCAGATGAAGATCCCACAATGTTTGACATAACTTACAGAGGAAATCATACCTGTTCTCAGGGAAACAATGCCGTTCTGCCACCCAAGTCACCAGAAAAACATGAGAAACCAGCACACAGTCATAACATTGACATTCACCATGCACAGGCATCACAAGAAAGCCTTGCAAAGTTCAGAAGTATCTTGTCTGTCAACACAGATAATCTGGACAATGGAGATATGGCATATGCTTTCACTTTCCCTTCCACTTCATTTGGATGCATGAAACAAGACAACCACAGCTTGATTCCTTTGGCCCTGGAGAATGACTCCTTCTTAAGCGACCTATACCAAACACACCTGTTATCCCCAACAACACCAGAATCAAATTATTTCCCATCTCCAACTTTCCAGATGAATGAGTTTGATGGGATCTACAACAGGTCACATTCGAAATCCGATATCAATGAGATCATTTCCACCAACACATCAGCAACCAATTCTCCAATTCCTGATTTCAATTTCTCACTTGATCCGGTGGAAATTGATCCAAATTTCCCTTTCAATACCCCAGGATTTTTGTGCTGA 1080 0.4398 MESDLSWERNTLINELIQGMEVARKLKADLKLPYSVDTRDLLLQRILSSYEKALLILRCSNASTSELQGMNQATPTLLPESPLSVHGSPLREDVHGAIKDHHNSKKRKITPKWMDRVRVSCESGLEGPHEDGYNWRKYGQKDILGAKYPRSYYRCTFRSTQGCWATKQVQRSDEDPTMFDITYRGNHTCSQGNNAVLPPKSPEKHEKPAHSHNIDIHHAQASQESLAKFRSILSVNTDNLDNGDMAYAFTFPSTSFGCMKQDNHSLIPLALENDSFLSDLYQTHLLSPTTPESNYFPSPTFQMNEFDGIYNRSHSKSDINEIISTNTSATNSPIPDFNFSLDPVEIDPNFPFNTPGFLC* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0187 359 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 355 IPR044810 GO:0003700
Gso8g0187 359 Pfam WRKY DNA -binding domain 130 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g0187 359 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 355 - -
Gso8g0187 359 ProSiteProfiles WRKY domain profile. 124 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g0187 359 SUPERFAMILY WRKY DNA-binding domain 128 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso8g0187 359 Gene3D WRKY domain 115 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso8g0187 359 SMART WRKY_cls 129 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0187 Gso-Chr8 1773508 1775414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0187 5 259 WRKY Transcription Factor Family AT4G23810 45.993 5.87e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso8g0187 WRKY 3.9e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0187 - - gmx:100127375 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1832 5 41565692 41567552 Gso8g0187 8 1773508 1775414 GST