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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Gso8g0178
ATGGCTTCATCTTCCATCAAACACACTCACCACCTTAACCGCACAAAACTCTTCATGAAAGAAGAAACCCTTTTGAAAAAGAAGCATCACTATCCCAAAATCATACGAATACGTGTCACCGACGCCGACGCTACCGACTCCTCCAGCGACGACGACGAGCCCTCCATGTCCTCCACGCGCCGCAGAGTAAAAAACTTCGTCAACGAAATTACCATCCAAGGCGGCGGCGGTGGTGGTGGCGACGTTAACGTTGTTTCTAAGAAAAGAAGATTCAAGTCCGGTGCCGGAGCTCCGTTATGTCGGCGGAAGACGGGGGCGAAGAAGTTCCGGGGAGTGAGGCAGCGGCCATGGGGGAAGTGGGCGGCGGAGATAAGAGACCCGTCGCGCCGCGTCCGGCTGTGGCTGGGAACCTACGACACCGCCGAGGAAGCTGCCATTGTGTACGACAACGCGGCCATTCAGCTGCGTGGCGCCGACGCGCTCACCAATTTCATAACGCCGCCGCCGGAGAACAGAAAAACCGGTTACTGCTCCGGCGAGGAGTCTCGCAACAACCACGACTTGCGTTCCCCCACTTCGGTTCTTGGGCGCTGTTCGGTGTCCGAGGAAGCTGTAACTGCAAACGACGTATTTGGAGGCTCTAGTGAGTGCGAGTATTCATGCGTTTCGGAGTCAGTGTTTCCTATTCCTAACGAGGTGGTGTTTGACTTTGAAAGCACGTTAGATATGTTTGATGAAGGGATTAATAATGTTGTGGCAGAGACTAGTATATTCTTGGCGGAGGATTTAGATTTGGGTTTTACGAGTTGGCATAGAGAGTGTGATAATTTCCAAGACATTGGGGGGGATTTGTTTGTTTGGGATCCTCTTGTCGCTCTTTGA
882
0.5272
MASSSIKHTHHLNRTKLFMKEETLLKKKHHYPKIIRIRVTDADATDSSSDDDEPSMSSTRRRVKNFVNEITIQGGGGGGGDVNVVSKKRRFKSGAGAPLCRRKTGAKKFRGVRQRPWGKWAAEIRDPSRRVRLWLGTYDTAEEAAIVYDNAAIQLRGADALTNFITPPPENRKTGYCSGEESRNNHDLRSPTSVLGRCSVSEEAVTANDVFGGSSECEYSCVSESVFPIPNEVVFDFESTLDMFDEGINNVVAETSIFLAEDLDLGFTSWHRECDNFQDIGGDLFVWDPLVAL*
294
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Gso8g0178
293
PANTHER
SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR
5
289
-
-
Gso8g0178
293
SMART
rav1_2
108
171
IPR001471
GO:0003700|GO:0006355
Gso8g0178
293
ProSiteProfiles
AP2/ERF domain profile.
108
165
IPR001471
GO:0003700|GO:0006355
Gso8g0178
293
PANTHER
ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF2
5
289
-
-
Gso8g0178
293
SUPERFAMILY
DNA-binding domain
108
164
IPR016177
GO:0003677
Gso8g0178
293
CDD
AP2
107
164
IPR001471
GO:0003700|GO:0006355
Gso8g0178
293
Pfam
AP2 domain
108
157
IPR001471
GO:0003700|GO:0006355
Gso8g0178
293
Gene3D
AP2/ERF domain
107
166
IPR036955
GO:0003700|GO:0006355
Gso8g0178
293
PRINTS
Ethylene responsive element binding protein signature
109
120
IPR001471
GO:0003700|GO:0006355
Gso8g0178
293
PRINTS
Ethylene responsive element binding protein signature
131
147
IPR001471
GO:0003700|GO:0006355
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Gso8g0178
Gso-Chr8
1707209
1708778
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Gso8g0178
1
293
AP2-EREBP Transcription Factor Family
AT4G23750
42.000
3.29e-54
177
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
AP2/ERF-ERF
Gso8g0178
AP2
2.2e-13
CL0081
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Gso8g0178
-
-
gmx:100776453
560.066
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Gso5g1820
5
41483140
41484897
Gso8g0178
8
1707209
1708778
GST
Gso11g0164
11
1352040
1353836
Gso8g0178
8
1707209
1708778
PCT
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