Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0177 ATGGAATTTCTACCCATTTTGTCTTCCATTTCCCTTTTGTTGTGTTTGGTTTTGTGGCAAGGAAGTGGTGAACCTGTTGAAGATAAGGAGGCTTTGCTTGACTTTGTGAACAAGTTCCCTCCTTCAAGGCCTTTGAATTGGAATGAGAGTTCCCCCTTGTGTGATTCTTGGACTGGAGTGACTTGCAATGTAGACAAGTCCAAAGTAATAGCAATTAGGTTGCCAGGGGTTGGATTTCATGGCAGTATTCCACCTGATACTATTAGCCGCCTCTCGGCACTGCAAACTTTGAGCCTCAGATCCAATGTAATAACTGGCCATTTTCCTTCTGATTTTTTCAATCTCAAGAACTTGTCTTTTCTCTATCTTCAGTTCAACAATATTTCTGGTCCTTTGCCTGACTTCTCAGCCTGGAAGAACCTCACTGTTGTCAATTTGTCCGATAACCATTTCAATGGCACCATCCCTTCCTCCCTTAGCAAATTGACTCAGCTTGCTGGTTTGAACCTTGCAAACAACACCCTTTCTGGAGAAATTCCTGACCTCAACCTGTCAAGACTGCAGGTGCTGAATTTGTCCAACAACAACTTGCAGGGCAGTGTTCCTAAATCCCTGCTAAGGTTTTCTGAGTCTGCATTCTCTGGGAATAACATTTCCTTTGGAAGTTTTCCCACGGTTTCTCCGGCGCCTCAACCAGCTTATGAGCCGTCTTTCAAGTCCAGGAAGCATGGAAGGCTCAGCGAAGCGGCGCTGCTGGGAGTTATTGTTGCTGCTGGTGTTTTAGTCCTCGTGTGTTTTGTTTCTTTGATGTTTGTGTGCTGCTCAAGAAGAGGTGATGAGGATGAGGAAACATTCAGTGGAAAGTTGCACAAGGGAGAAATGTCTCCTGAGAAAGCAGTTTCAAGGAACCAGGATGCAAATAATAAACTGGTTTTCTTTGAGGGATGTAATTATGCCTTTGATTTAGAGGATTTATTGAGGGCTTCTGCTGAGGTTCTGGGAAAGGGAACGTTTGGAACTGCCTACAAGGCAATACTTGAGGATGCAACCACGGTTGTTGTGAAGAGGCTGAAGGAGGTAGCCGTTGGAAAGAAGGATTTTGAGCAGCACATGGAGATTGTAGGAAGTCTTAAGCATGAGAATGTGGTTGAGCTCAAGGCATATTATTATTCCAAAGATGAAAAACTCATGGTATATGATTACCACAGTCAGGGGAGCATCTCTTCCATGTTGCATGGCAAAAGAGGAGAGGATAGGGTGCCTTTAGATTGGGATACTCGGCTGAAAATAGCCTTAGGTGCTGCAAGAGGCATTGCTCGTATCCATGTTGAGAATGGTGGCAAGCTTGTGCATGGCAACATAAAATGCTCGAACATCTTCCTCAATTCCAAACAGTATGGCTGTGTGTCTGACCTTGGCCTGGCAACCATATCAAGCTCACTTGCCTTACCAATATCACGAGCAGCCGGTTACCGTGCACCCGAAGTTACAGACACCAGAAAGGCAGCACAGCCCTCAGATGTTTACAGCTTTGGTGTAGTGTTGCTAGAGCTTCTGACTGGGAAATCCCCTATCCACACAACTGGTGGTGATGAGATTATCCACCTTGTGAGGTGGGTTCATTCGGTTGTGCGCGAGGAGTGGACAGCTGAAGTGTTTGACTTGGAGCTGATGAGATATCCTAACATAGAAGAAGAGATGGTGGAAATGTTGCAGATAGCCATGTCATGTGTGGTTAGGATGCCTGATCAGAGGCCTAAGATGTCTGAAGTTGTGAAGATGATTGAAAATGTGAGGCAGACTGATGCACAGACTCACTCATCATCTGGGAACCAAGCAGAACAACTTAAATTTTCTCAACGTGACAATGGTAACTCTCCTTCCACTCCCTCCTACTTCCAGAGAGGAAGTGAATGA 1917 0.4523 MEFLPILSSISLLLCLVLWQGSGEPVEDKEALLDFVNKFPPSRPLNWNESSPLCDSWTGVTCNVDKSKVIAIRLPGVGFHGSIPPDTISRLSALQTLSLRSNVITGHFPSDFFNLKNLSFLYLQFNNISGPLPDFSAWKNLTVVNLSDNHFNGTIPSSLSKLTQLAGLNLANNTLSGEIPDLNLSRLQVLNLSNNNLQGSVPKSLLRFSESAFSGNNISFGSFPTVSPAPQPAYEPSFKSRKHGRLSEAALLGVIVAAGVLVLVCFVSLMFVCCSRRGDEDEETFSGKLHKGEMSPEKAVSRNQDANNKLVFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDATTVVVKRLKEVAVGKKDFEQHMEIVGSLKHENVVELKAYYYSKDEKLMVYDYHSQGSISSMLHGKRGEDRVPLDWDTRLKIALGAARGIARIHVENGGKLVHGNIKCSNIFLNSKQYGCVSDLGLATISSSLALPISRAAGYRAPEVTDTRKAAQPSDVYSFGVVLLELLTGKSPIHTTGGDEIIHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMSEVVKMIENVRQTDAQTHSSSGNQAEQLKFSQRDNGNSPSTPSYFQRGSE* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0177 638 SUPERFAMILY L domain-like 38 208 - -
Gso8g0177 638 Pfam Protein kinase domain 330 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0177 638 Pfam Leucine rich repeat 82 128 IPR001611 GO:0005515
Gso8g0177 638 Gene3D Ribonuclease Inhibitor 27 136 IPR032675 -
Gso8g0177 638 Gene3D Phosphorylase Kinase; domain 1 293 401 - -
Gso8g0177 638 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Gso8g0177 638 ProSitePatterns Protein kinases ATP-binding region signature. 333 364 IPR017441 GO:0005524
Gso8g0177 638 MobiDBLite consensus disorder prediction 601 638 - -
Gso8g0177 638 Gene3D Transferase(Phosphotransferase) domain 1 403 625 - -
Gso8g0177 638 PANTHER PROTEIN, PUTATIVE-RELATED 22 608 - -
Gso8g0177 638 ProSiteProfiles Protein kinase domain profile. 327 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0177 638 Gene3D Ribonuclease Inhibitor 137 227 IPR032675 -
Gso8g0177 638 SUPERFAMILY Protein kinase-like (PK-like) 331 595 IPR011009 -
Gso8g0177 638 PANTHER OS05G0588300 PROTEIN 22 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0177 Gso-Chr8 1694002 1698473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0177 17 631 Receptor kinase-like Gene Family AT4G23740 65.127 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso8g0177 Pkinase 3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0177 - - gmx:100804799 1229.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1819 5 41470704 41474951 Gso8g0177 8 1694002 1698473 GST
Gso11g0165 11 1366713 1370484 Gso8g0177 8 1694002 1698473 PCT