Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0166 ATGGAACAGAAAAGCATTCTGATATCGGCTTTGGGTGTTGGGGTGGGAGTGGGAGTGGGGATTGGATTGGCCTCTGGACAAAGCGTTGGAAAATGGGGAGCCAACACTTTCTCCTCGAACGCTATTACTGCTGAGAAGATGGAGCAGGAAATGCTCAGACAAGTTGTTGACGGAAGAGAAAGCAACGCCACTTTTGATAAATTCCCTTATTACCTCAGTGAGCAAACACGGGTTTTGCTGACAAGTGCGGCTTATGTCCATTTAAAGCATGCTGAGGTTTCTAAGTATACACGTAATCTTGCTCCTGCAAGCCGGACTATTCTGCTTTCAGGGCCAGCAGAACTTTACCAACAGATGCTTGCCAAGGCTTTAGCTCATTACTTTGAGGCCAAGTTGCTTCTGTTAGATTTAACTGACTTTTCATTGAAGATTCAGAGTAAATATGGTTTTTCCAACATGGAATCTTCTTTCAGAAGATCCACTTCAGAGACTACTTTGGAGCGGCTATCTGATCTATTTGGGTCATTTTCAATCTTTTCACAAAGGGAGGAACCTAAAGGCAAAATGAACAGGCCTAGCAGTGGAGTGGACCTCCAATCAATGGGGGCTGAAGCATCTTGTAATCCTCCAATACTCCGTAGGAATGCTTCTTCCTCTTCAAATATTAGTGGCCTTGCTTCGCAAACCTATCCTACAAATTCAGTTCCTCTGAAGCGCACAACCAGCTGGTCTTTTGACGAAAAGCTTCTTATACAGTCTCTCTATAAGGTTCTGGCTTTTGTGTCAAAAACCTATCCCATTGTGCTATATTTGCGGGATGTTGATAGGCTGTTATATAAATCACAAAGGATATATAACTTGTTCCAAAAAATGTTGAAGAAACTATCTGGACCAGTTTTGATTCTTGGTTCTCGAGTTATAGATTCTGGTAATGACTATGAAGAGGTGGATGAGAAAATTAATTCGCTCTTCCCATACAACATAGAAATCAGGCCACCAGAAGATGAATCGCATCTTGTCAGCTGGAAGTCTCAATTGGAAGAGGATTTGAAGATGATACAAGTTCAGGATAACAAAAACCATATCATGGAAGTGCTTGCAGCCAATGATCTTGATTGTGATGACCTGGATTCCATTTGTGTCTCAGACACAATGGTTCTCAGTAACTATATAGAAGAGATTATTGTGTCAGCAATTTCGTATCATTTGATGAAAAACAAAGACACTGAATACAGAAATGGGAAGCTCGTTATTTCTTCCAATAGTTTGTCCCATGCATTGAATATATTCCACAAGGGGAAATCCAGTAGAAGAGATACATCAAAATTGGAAGATCAAGCTGTAAAATCTGAGCAAATAGAGGAGGGAACTGCTATGAAACCAGAAGCAAAGTCTGAAAATGCCGCTCCTGTAAAAAAGGCTGAAGCAGAAACATTAAGTTCAGTGGGAAAGACAGATGGTGAAAAATCAGTTCCTGCACCCAAAGCCGCTGAAGTTCCTCCTGATAATGAGTTTGAGAAGCGAATAAGGCCCGAGGTAATACTAGCAAATGAGATTGATGTCACATTCTCTGATATTGGTGCCTTAGATGAGACCAAAGAATCCCTTCAAGAACTAGTAATGCTTCCTCTTAGAAGGCCAGACCTTTTCACTGGAGGCCTTCTAAAGCCTTGTAGAGGAATATTGCTGTTTGGACCTCCTGGAACTGGGAAGACAATGCTGGCAAAGGCCATTGCAAAGGAGGCCGGAGCAAGTTTCATCAATGTGTCCATGTCTACCATCACTTCTAAGTGGTTTGGTGAAGATGAGAAGAATGTTCGCGCTTTATTCACACTTGCAGCCAAGGTCTCCCCAACTATAATATTCGTGGATGAGGTTGATAGCATGCTTGGGCAACGGACCAGAGTTGGGGAACATGAAGCCATGAGGAAAATAAAGAATGAATTTATGACCCATTGGGATGGACTTTTGACAAAGCAAGGGGAGCGGATCCTTGTTCTTGCTGCAACCAATAGGCCTTTCGACTTGGATGAAGCTATTATTAGGCGATTTGAAAGAAGGATTATGGTAGGACTACCATCTGTGGAGAACAGGGAAAAGATTTTGAGGACTCTTTTGGCAAAAGAAAAGGTGGACAACGAACTTGAGTTTAAGGAACTTGCAACTATGACAGAAGGATATACTGGAAGTGATCTAAAGAACTTGTGCACAACTGCTGCTTATCGGCCTGTTAGAGAGCTAATTCAGCAAGAGAGGATAAAGAGTCTGGATAAAAAGCAGAAAGCTTCCAGGGGACAGAATAAAGATGTCCAAGAAAGTCGAGGACAATCCGTAGTAGGAAATACTCAAGATGCTCTAGATGAAGAAGAGGAAGTTAAACAGGAAAGAGTTATTATTACCCTTAGGCCATTGAATATGCAGGATTTCAAAGAGGCCAAAAATCAGGTTGCTGCAAGCTTTGCAGCTGAAGGGGCTGGAATGGGTGAGTTGAAACAGTGGAACGATTTGTACGGAGAAGGCGGTTCAAGGAAGCAGCAGCAGTTGTCTTACTTCCTGTGA 2559 0.4224 MEQKSILISALGVGVGVGVGIGLASGQSVGKWGANTFSSNAITAEKMEQEMLRQVVDGRESNATFDKFPYYLSEQTRVLLTSAAYVHLKHAEVSKYTRNLAPASRTILLSGPAELYQQMLAKALAHYFEAKLLLLDLTDFSLKIQSKYGFSNMESSFRRSTSETTLERLSDLFGSFSIFSQREEPKGKMNRPSSGVDLQSMGAEASCNPPILRRNASSSSNISGLASQTYPTNSVPLKRTTSWSFDEKLLIQSLYKVLAFVSKTYPIVLYLRDVDRLLYKSQRIYNLFQKMLKKLSGPVLILGSRVIDSGNDYEEVDEKINSLFPYNIEIRPPEDESHLVSWKSQLEEDLKMIQVQDNKNHIMEVLAANDLDCDDLDSICVSDTMVLSNYIEEIIVSAISYHLMKNKDTEYRNGKLVISSNSLSHALNIFHKGKSSRRDTSKLEDQAVKSEQIEEGTAMKPEAKSENAAPVKKAEAETLSSVGKTDGEKSVPAPKAAEVPPDNEFEKRIRPEVILANEIDVTFSDIGALDETKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKQGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREKILRTLLAKEKVDNELEFKELATMTEGYTGSDLKNLCTTAAYRPVRELIQQERIKSLDKKQKASRGQNKDVQESRGQSVVGNTQDALDEEEEVKQERVIITLRPLNMQDFKEAKNQVAASFAAEGAGMGELKQWNDLYGEGGSRKQQQLSYFL* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0166 852 CDD AAA 559 692 - -
Gso8g0166 852 ProSitePatterns AAA-protein family signature. 664 683 IPR003960 GO:0005524|GO:0016887
Gso8g0166 852 Gene3D - 520 692 IPR027417 -
Gso8g0166 852 SMART AAA_5 557 694 IPR003593 -
Gso8g0166 852 SMART AAA_5 103 334 IPR003593 -
Gso8g0166 852 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 520 757 IPR027417 -
Gso8g0166 852 MobiDBLite consensus disorder prediction 769 783 - -
Gso8g0166 852 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 852 - -
Gso8g0166 852 MobiDBLite consensus disorder prediction 434 504 - -
Gso8g0166 852 MobiDBLite consensus disorder prediction 434 471 - -
Gso8g0166 852 MobiDBLite consensus disorder prediction 756 788 - -
Gso8g0166 852 Pfam AAA+ lid domain 716 750 IPR041569 -
Gso8g0166 852 Pfam ATPase family associated with various cellular activities (AAA) 561 691 IPR003959 GO:0005524|GO:0016887
Gso8g0166 852 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 373 IPR027417 -
Gso8g0166 852 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 852 - -
Gso8g0166 852 Gene3D - 693 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0166 Gso-Chr8 1582142 1588399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0166 508 753 Calmodulin-binding Proteins AT3G56690 39.370 2.25e-44 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0166 - - gmx:100807464 1595.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1808 5 41363383 41372051 Gso8g0166 8 1582142 1588399 GST
Gso11g0175 11 1446778 1453364 Gso8g0166 8 1582142 1588399 PCT