Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0158 ATGGATGAATTTGCGTGCTTGAGAGATTGGGATTTGGAAGCTATTGTAAGAGGAAGCACCGGTGAAGCCATCACCATGGATGACCCAAATGCTGATTTTTCTTATTTCTTCTCTGAACAAGATGAGCTACTTGATAGCTTTCCCGAATTCTCAGAAACCACGAGAGTTCTCGATGATTTGGAAGAGCTTTACAAACCCTTCTACCCAGTTTTGCACCCTCTTTCACCGCACACCATCGTTACAACTTCCCTACCTATCAACATGGAACCTAAACAAGTTATCAAAGCATCAGAACAGAAAGTAGCAGCCCTGCAAGGATTGAAAGTCCCCGCAGCACCTAAATGTAAAAAAAGCAAGAAGAGCCAGAACAAGAGCGTGGTGAAGCAAGTGACAACAGCAGAAGGTCTTGACGATGCATGGGCATGGCGTAAATATGGACAGAAACCAATAAAGGGTTCACCATATCCTCGAAGCTATTATAGGTGCAGCAGTTCCAAAGGGTGTTTGGCAAGGAAACAGGTTGAAAGAAGCCACTTAGATCCTGCGGTTTTTCTGGTAACCTACACTGCTGAACACAGCCATCCACACCCAACTCGAAGAAACTCTCTTGCTGGAACCACAAGGAAGAACAATTCCCTTGTTCCTCCTCCAACCACTCATCGTCACCAAAAGAATACTAATTGTTCCTCAAAGTCCATTGAAGTGCAACAAAGCATGAACTTGAAGAAAGAGGAAGATTTTACTGACTGGTTGGATGATGATAGTGCTCAATTTGTTGATGGTTGGATTCCAAGCTCGGATCTTGAGAAACTGATAGGGCTTGAGTGCCAACATTTTGCATTAGATGGTGGTTTCACGGATGATTTTCCACACCCTTAA 879 0.438 MDEFACLRDWDLEAIVRGSTGEAITMDDPNADFSYFFSEQDELLDSFPEFSETTRVLDDLEELYKPFYPVLHPLSPHTIVTTSLPINMEPKQVIKASEQKVAALQGLKVPAAPKCKKSKKSQNKSVVKQVTTAEGLDDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERSHLDPAVFLVTYTAEHSHPHPTRRNSLAGTTRKNNSLVPPPTTHRHQKNTNCSSKSIEVQQSMNLKKEEDFTDWLDDDSAQFVDGWIPSSDLEKLIGLECQHFALDGGFTDDFPHP* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0158 292 MobiDBLite consensus disorder prediction 199 230 - -
Gso8g0158 292 Gene3D WRKY domain 118 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso8g0158 292 SMART WRKY_cls 136 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g0158 292 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 9 252 - -
Gso8g0158 292 SUPERFAMILY WRKY DNA-binding domain 130 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso8g0158 292 MobiDBLite consensus disorder prediction 193 230 - -
Gso8g0158 292 ProSiteProfiles WRKY domain profile. 131 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g0158 292 Pfam WRKY DNA -binding domain 137 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g0158 292 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 9 252 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0158 Gso-Chr8 1488231 1489965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0158 1 224 WRKY Transcription Factor Family AT4G23550 46.983 1.10e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso8g0158 WRKY 2.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0158 K13426 - gmx:102667104 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1799 5 41267165 41269047 Gso8g0158 8 1488231 1489965 GST
Gso11g0184 11 1527412 1528587 Gso8g0158 8 1488231 1489965 PCT