Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0147 ATGGCCCGACAATTGTGTGAAGACAAATCCAAGGACATGGCTTCATCAACTCATCATGGGTTGTTCTACTCAGATGTGTCATCCCATAACCAAACTATTCAATCCCATCTGATGAACCACATCCAAGGCTTTGTGACCGAGACCGACCCAGAGATGTTCAACCTCACCACAGGCATGGAGATGATAGGGTTTTCCAAGAACCTTGAGCAAAACAGTGAAAGCAACGGTGTCATGTGGAAAAGTTTCTTCTGCAAACCAGGTCAACACGCGGGTCCTTCCTCTTCCAAAACGATGAACGAGTCTTGTAGCAATTTTTATAACCACCAGCATGATCATAAGTATAATAAGCAAGACTTCACATCAGGGATTAATTCTGAGACAAGTACCGATAACTTAGTTGTCGGTGGTGCCCATGATTCTGCCCCGTGGCAAGAGAACAGGCTAATGGTTGATGATTCTTCTTTAAGGTGCGTGTTCCCTTGTGAAGGTAACGAAAGGCCGAGTCAAGGCCTTTCACTCTCTCTTAGTTCAACCAATCCTTCAGGTATTGGCTTGCAATCTTTTGAGCTAAGACAAACAACAAGCCATCATCATCATCAGCAGCATCTTTCTGATTTTGTTTCAAGAGAGGGTTTTTTTGGAAAGCCAGTCAATGCTCAACAACAACAAGAAATGTTGCAAGATGGGTATTTGAGTCCTAACAAAGCTGCGAATATTTATCAGCAGGGACATTTTCTAATCAAGAACTCCAAGTTCTTGGTGCCTTCACAGGTCCTTCTGAACGAGTTTTGTAGCCTAGGGACAAAGGAAAATGATGTGCCAAAGCAAAAGAACAAGCAGTGGGAAGAAGGTAATAATAACGGTGGTGGTTCCTCCAAGAACCATTCTCTTAGCTCTCTAGAGTTTGTGGAATTGCAGAAGAGAAAGACAAGGCTGCTCGCGATGCTGGAAGAGGTTGATAGAAGATACAAACACTACCGTGACCAAATGAAGGCAGTGATGTCCTCCTTTGAAGCAGTGGCGGGTAATGGTGCAGCCACTGTTTACTCGGCTTTGGCTTTGAAAGCCATGTCAAGGCATTTTAGGTGTTTGAAGGATGGAATTATGGATCAAATTCGAGCCACAAGAAAAGGCATGGGAGAGAAAGAACTCGCTGCAGTACCCGGCACAACAAGGGGCGAAACACCTAGGCTTAAAATCATTGACCAATCACTGAGACAACAAAGGGCCTTTCAGCAAATTAGCATCATGGAAACTCATCCTTGGAGACCCCAACGTGGCCTTCCCGAACGATCCGTTTCAGTTCTTCGAGCTTGGCTTTTCGAGCACTTTCTGCATCCGTACCCAAGCGATGTTGATAAACATATCCTAGCCCGCCAAACCGGTCTCTCCAAAAGTCAGGTTTCGAATTGGTTTATTAACGCGAGGGTGAGGCTATGGAAGCCAATGGTGGAGGAAATGTATTTGGAAGAAGAGAAGGAGCATCAAAACGACGTAGCATCGTCGGAGGGAGGAGGCATCAATATTCTCGGGGATCAGAAGCCAACACAGGCTCGACTCGTTCGAATTGACTCAGAGTGCATGTCGTCTATCGTCAACAACCCAGATGACAAAAACGACACAAAGAGCGGCAAAACCATCCAAAACGACAACCAAATGGACGCATTCGGGTCGGTGGAGCTTGACTTTTGGTCCTACACGCACCAGTACTCCTCCGGACACAGTGGCGGCGTGTCGTTGACGCTGGGGTTACAGCAGCACGGTGAAAGCGGGGTGAGTTTAGCATTCCCGCCAGCGGCAACACAGAGCTCCATGTTTTACCCACGGGATCAGATTGAAGATTGCCAAACAGTTCAGTACTCTCTTGTGGATGGCAAAGGACAAAACATGCCTTATAGGAATCTCATGGGGACACACTTGCTTCATGATCATTTGGTATGA 1941 0.4632 MARQLCEDKSKDMASSTHHGLFYSDVSSHNQTIQSHLMNHIQGFVTETDPEMFNLTTGMEMIGFSKNLEQNSESNGVMWKSFFCKPGQHAGPSSSKTMNESCSNFYNHQHDHKYNKQDFTSGINSETSTDNLVVGGAHDSAPWQENRLMVDDSSLRCVFPCEGNERPSQGLSLSLSSTNPSGIGLQSFELRQTTSHHHHQQHLSDFVSREGFFGKPVNAQQQQEMLQDGYLSPNKAANIYQQGHFLIKNSKFLVPSQVLLNEFCSLGTKENDVPKQKNKQWEEGNNNGGGSSKNHSLSSLEFVELQKRKTRLLAMLEEVDRRYKHYRDQMKAVMSSFEAVAGNGAATVYSALALKAMSRHFRCLKDGIMDQIRATRKGMGEKELAAVPGTTRGETPRLKIIDQSLRQQRAFQQISIMETHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSKSQVSNWFINARVRLWKPMVEEMYLEEEKEHQNDVASSEGGGINILGDQKPTQARLVRIDSECMSSIVNNPDDKNDTKSGKTIQNDNQMDAFGSVELDFWSYTHQYSSGHSGGVSLTLGLQQHGESGVSLAFPPAATQSSMFYPRDQIEDCQTVQYSLVDGKGQNMPYRNLMGTHLLHDHLV* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0147 646 Pfam Homeobox KN domain 439 478 IPR008422 GO:0003677|GO:0006355
Gso8g0147 646 ProSiteProfiles 'Homeobox' domain profile. 419 482 IPR001356 GO:0003677
Gso8g0147 646 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 601 - -
Gso8g0147 646 SMART prehox3 241 370 IPR006563 -
Gso8g0147 646 SUPERFAMILY Homeodomain-like 423 488 IPR009057 -
Gso8g0147 646 MobiDBLite consensus disorder prediction 270 295 - -
Gso8g0147 646 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 1 601 - -
Gso8g0147 646 Pfam Associated with HOX 247 368 IPR006563 -
Gso8g0147 646 SMART HOX_1 422 486 IPR001356 GO:0003677
Gso8g0147 646 MobiDBLite consensus disorder prediction 280 295 - -
Gso8g0147 646 CDD homeodomain 422 483 IPR001356 GO:0003677
Gso8g0147 646 Gene3D - 425 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0147 Gso-Chr8 1371936 1375971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0147 98 643 Homeobox Transcription Factor Family AT5G41410 44.663 3.07e-140 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Gso8g0147 POX 5.2e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0147 - - gmx:100792789 1287.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1789 5 41149249 41153163 Gso8g0147 8 1371936 1375971 GST
Gso11g0192 11 1600079 1604176 Gso8g0147 8 1371936 1375971 PCT