Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0145 ATGGGTTTCCCAGTGGGGTACTCGGAGCTCCTGTTCCCGAAGCTTCTCCTTCACATCCTCTCCCTCTTGGGCCTCCTCAGGAAGCTGATTTGCAGCCTCCTCCGCTTCATGGGCCTCCACGACTTCCTCGAGCCCGACATTGCCGCCTGGCCCGAAACCCGAATGCCCGAAGAATTCGAGTCCGTGTCGGCCACGCTCATCCGGGAAATCCTGCCGGTGGTGAAGTTCCGGGAGCTGGTGGACCCCCCGGAGACGTGCGCGGTGTGTCTGAGCGAGTTCGAGGAAAACGATGAGATCAGACAGCTGGCGAATTGTCGCCACATATTCCACCGAGGATGTTTGGACCGTTGGATGGGGTACGATCAGAGAACATGCCCTCTCTGCAGAATGCCCTTTATACCCGACGAAATGCAAGGTGCTTTTATTGAGAGACTCTGGGCTGCCTCTGGTATCGCTGAATATCCGCATGTTGCTCCTTTCTAG 483 0.5714 MGFPVGYSELLFPKLLLHILSLLGLLRKLICSLLRFMGLHDFLEPDIAAWPETRMPEEFESVSATLIREILPVVKFRELVDPPETCAVCLSEFEENDEIRQLANCRHIFHRGCLDRWMGYDQRTCPLCRMPFIPDEMQGAFIERLWAASGIAEYPHVAPF* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0145 160 ProSiteProfiles Zinc finger RING-type profile. 86 129 IPR001841 -
Gso8g0145 160 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 153 - -
Gso8g0145 160 Pfam Ring finger domain 85 129 IPR001841 -
Gso8g0145 160 SMART ring_2 86 128 IPR001841 -
Gso8g0145 160 PANTHER BRH1 RING FINGER PROTEIN 1 153 - -
Gso8g0145 160 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 132 IPR013083 -
Gso8g0145 160 SUPERFAMILY RING/U-box 66 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0145 Gso-Chr8 1342860 1343710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0145 1 150 C3H Transcription Factor Family AT1G63840 56.494 5.80e-57 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0145 K16281 - gmx:100817079 301.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1787 5 41117091 41117934 Gso8g0145 8 1342860 1343710 GST
Gso11g0194 11 1635088 1636236 Gso8g0145 8 1342860 1343710 PCT