Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0143 ATGTCTTCTGATCTCTATGCTTTTGACACTACCTTATACTCACATTCAAACTCAGACTTGGTTTCCTCTGATGGAGTTAGAGACCTTCCTTTAATCTCAGAATCTTTTCCTTTCTTTGCCAATTCTCAAGAGAATTGCAATAATAATGCTCTTTCTAACGCTCTCGACCCATTTTCCCCTTCTTTTTTCTCTTTCTCCCCTCCAAGTTCCCACTTGGAAAGCCTTAGTCTTTATCATGCTAACCGCTTGCAGTCTCTGTCAAATGGCCAAAACTTGGCAAATGAATTTGGGAGTTTCTCAGCTTTTGATGGGTCAGAAATGAAAACTGAGGAATGCCAAATGGGTGGTGATTATGCATACAGTCAGCAACTCCTTCCTCACAGTTATAGTGGTGCTGAGAATTTTTCCAAGTACATGCAGAGGAGCTTCAGCAGCAACTCATACGAAGGGAAACCAGCTTACAGTGACCCTCGCGAGGATTCTCCAAAATTTCAAAGGCATGAGATGAGTTCCCCTGAAGACAACACTGTCTTTGGTGGACAAATGAGAAGGGTTTGCAGCACAGGCGATTTGCAGGAATCGAACTTCAAAGTAGGGCGTTACAGTGCGGAGGAAAGAAAAGAAAGAATTTCTAAATACAGAGCCAAGAGAAACCAGAGGAACTTCAACAAAACCATTAAGTATGCATGCCGAAAAACACTAGCAGATAATCGACCACGCATTCGTGGCAGATTTGCCCGCAACGACGAGTCCAGCGAGACTCTCAAGGTTTCATGTTCTACCCGAGATGAAGATGATGTCGATTTCTGGATTGAAGAGTTGCGATTGCATGAAGAGCAAGACGATGTAACAGTGGGAGCAGAACAGTACTTGAGAAATTATGGAGCTAGCCAGTTTCAATACGGTGGCTTTTGA 915 0.4328 MSSDLYAFDTTLYSHSNSDLVSSDGVRDLPLISESFPFFANSQENCNNNALSNALDPFSPSFFSFSPPSSHLESLSLYHANRLQSLSNGQNLANEFGSFSAFDGSEMKTEECQMGGDYAYSQQLLPHSYSGAENFSKYMQRSFSSNSYEGKPAYSDPREDSPKFQRHEMSSPEDNTVFGGQMRRVCSTGDLQESNFKVGRYSAEERKERISKYRAKRNQRNFNKTIKYACRKTLADNRPRIRGRFARNDESSETLKVSCSTRDEDDVDFWIEELRLHEEQDDVTVGAEQYLRNYGASQFQYGGF* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0143 304 MobiDBLite consensus disorder prediction 146 179 - -
Gso8g0143 304 MobiDBLite consensus disorder prediction 153 170 - -
Gso8g0143 304 PANTHER CCT MOTIF FAMILY PROTEIN 7 301 - -
Gso8g0143 304 Pfam CCT motif 206 248 IPR010402 GO:0005515
Gso8g0143 304 ProSiteProfiles CCT domain profile. 206 248 IPR010402 GO:0005515
Gso8g0143 304 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 7 301 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0143 Gso-Chr8 1323952 1326223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0143 202 254 C2C2-CO-like Transcription Factor Family AT5G24930 49.057 6.79e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso8g0143 CCT 5.7e-18 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1785 5 41104827 41107253 Gso8g0143 8 1323952 1326223 GST
Gso11g0196 11 1642440 1644682 Gso8g0143 8 1323952 1326223 PCT