Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0141 ATGGGCGGTTGCTGTTGTTGTTGTTGTTCTGCTAAGGAGACTGTGTTGAGCGCTCCACCTGCGTACTATTATTATCCAAGAGCATCAGAAGAGCATGTTCCTCTATCATCTCACCAGGGTGCTGCTTCTGCTTTCTCTGGGCGGCTCTTGGTTGATACTAATCTAGATACTTCATCTCCTGATACTTATAGACCTCCCCCTGCTCCTATCCCTTTCAATGTTACCTTGGGTACCACTCAAACTCCACCTGCGGCTCAAGAAATTCGTAGTGACAAGAATAATACTTCCTTGCATTCTACAAATTCTAATGCAATTCAAGAACCAGTTGCTGGAGACAATCATGGGACCTCGGCTAAGTTGGAAGAGCTGAAGGAATCAGACTGCAAAGTTCAAACCGATCTAGAGCTAGATTCTGCAAAGGGTTCCGAAATTGAACTTGCAAAGTCGGGAAAACCTATAGATGTAGTAGAAGAGGAGGATACATGCCCAATTTGTTTAGAAGAATATGATGCAGAGAATCCAAAACTCGCAACAAAATGTGACCATCATTTTCACCTTGCGTGCATTCTGGAATGGATGGAAAGAAGTGAGACTTGCCCTGTGTGCGATCAGGATTTGGTTTTCGACCCTCCCATTGAATAA 642 0.4408 MGGCCCCCCSAKETVLSAPPAYYYYPRASEEHVPLSSHQGAASAFSGRLLVDTNLDTSSPDTYRPPPAPIPFNVTLGTTQTPPAAQEIRSDKNNTSLHSTNSNAIQEPVAGDNHGTSAKLEELKESDCKVQTDLELDSAKGSEIELAKSGKPIDVVEEEDTCPICLEEYDAENPKLATKCDHHFHLACILEWMERSETCPVCDQDLVFDPPIE* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0141 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 140 208 IPR013083 -
Gso8g0141 213 Pfam Ring finger domain 160 202 IPR001841 -
Gso8g0141 213 SMART ring_2 162 202 IPR001841 -
Gso8g0141 213 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 213 - -
Gso8g0141 213 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 213 - -
Gso8g0141 213 MobiDBLite consensus disorder prediction 93 110 - -
Gso8g0141 213 SUPERFAMILY RING/U-box 156 209 - -
Gso8g0141 213 MobiDBLite consensus disorder prediction 93 114 - -
Gso8g0141 213 ProSiteProfiles Zinc finger RING-type profile. 162 203 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0141 Gso-Chr8 1300493 1303595 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0141 1 209 C3H Transcription Factor Family AT5G41350 55.189 3.53e-72 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0141 - - gmx:100816369 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1783 5 41085540 41088530 Gso8g0141 8 1300493 1303595 GST