Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0140 ATGGAAGAATGGTCAACATTCTCAAATGGGTCTTCCTTAGATTGCATTGGAGGAGTTGAACTTGAAACTGTTGGTGCATTTCCTGGAAATGGCTGTGGCCTTGGAAAGCACCATGTTGATAATGGTGCTGACAATGGCAAACTTAAACAGAAGTACTTGTTCTACCAACTGTTTCCTGCTTACCTGAAGGATAGTTGTTCCAAAGGTGGTGTTCGGCCTTTGCCAGTTTTAGTCGACGGTCAATGGCTGGATTTGTACAAACTGTTCTTCCTGGTAAAGGAAAGAGGTGGGTACGCCCGAGTGTCGAAGAAAAGATTGTGGGGTTCTGTGACCAAGGAATTGGGCTTGAACCTTGTGGTTTGCTGGTCTGTAAAATTAGTCTATGACAAGTATCTGAATGATTTCGATAGGTGGCTCAAGAAAACTTTTGAAGAGAAGAATTTAAAAAGCGGGAACCATGGGTGTGATTGGGGTTTAAAGTGGTTGCCATTCGATATTGAGAAAGAGTTTAGAGCCCTGTTATGTCCAAATCTAAAGGACAAAGATGATCACAAACTTGTCAAGTCAAAATCAATTAATAAAAAGAAAAACACTGATTTGGTTAACCACAAGAATGGTAATAATCTGTTGGACACCAAAGATCAAAATAATAAATCCGAGGATGTTCAACGCATTGAAGGTGATAATGATGAAAAATCAACTAATGGTGTTAAGGACAATCCTGCTACCTTGGGTGCAGAAGGTGCCAAGAAAGAATTTAACCCACACAAACGCAAGCGGGATGCATTGTCTGGCATGCTAAACTGGATGAAGCATGTTGCAAAGCATGCTCTTGATCCTTTAACTCAACCAATACCTAAACCATCAAAGTGGAAGGAATATAAAGGCCAGGACTTTTTTGGTCAATTTCTGAGGGCAAGAGAGGTTCTGTCACCGAGACAGCATGAAGAACCAAGCAGTGAATTGTCTTCTTTGCAGAAACAGAAGATGCACCCTGCCATGTATGAGGATCATGTTGCTCTTGGTTGCCATGCTACAAGAAAATTGAGATGCAGTGAAAGGTTGCCGTCCTTTGTTAAATCTCGGTCGTGCTCGTGCTGCAATCCATGTTCCCCCAACGGAAATAGATTGACAGGCTCACACATTATGGAGGCAGAAAAATGTCCTCTGGAGAAAACAACTGAAACACCAGATGTATCAACCACAATAACAATAGCTAAGCCATCTGGGGATGAGTCTCTCGAAAAGCAAGTTTCTGTAGGTCCTCGTTTTCAAGCAGAAGTCCCAGAATGGACTGGTGTATTTTCTGAGAGTGACTCTAAATGGTTGGGCACACATGTATGGTCTTTGAAAAATGACACTGAACCTGCTACAGCAACAGATGTTGGGAGAGGAAGACAAGAGATGTGTAGCTGTGAATTTCATGGTTCTGTTGAATGTGTTAGATTGCATATTGCTGAAAATAGGATGAAATTGAAGCTTGAATTGGGTTCTGAATTTTACCGTTTGGGATTTGATCGTATTGGTGAGGAAGTTTCACTTCAATGGACAACTGAAGAAGAACAGAGATTTAAGGATATCATGAAATCAAATATTTCCTCCAAAAATAAATATTTTTGGAACAATCCATCCAAATACTTTCCAAAGAAGACAAGAAGAAACTTGGTGAACTATTACTTCAATGTATTTCTTATTCAACTAAGAACCTATCAGAATCGGGTGACTCCAGAGAGCGTTGATAGTGATGATGATGAAGTAGAATTTGGATCTTTCAGCGATGGTTTTGGGATGGACGCTGTCAAGAGTCTTGGTGATGATTTCCTGGAGTGTTCTCTGAACAAGCAGTGTACTGATCTCAAATACACAAAATTAGAGTGCAAATTTGATAATTGGATCTGA 1899 0.4044 MEEWSTFSNGSSLDCIGGVELETVGAFPGNGCGLGKHHVDNGADNGKLKQKYLFYQLFPAYLKDSCSKGGVRPLPVLVDGQWLDLYKLFFLVKERGGYARVSKKRLWGSVTKELGLNLVVCWSVKLVYDKYLNDFDRWLKKTFEEKNLKSGNHGCDWGLKWLPFDIEKEFRALLCPNLKDKDDHKLVKSKSINKKKNTDLVNHKNGNNLLDTKDQNNKSEDVQRIEGDNDEKSTNGVKDNPATLGAEGAKKEFNPHKRKRDALSGMLNWMKHVAKHALDPLTQPIPKPSKWKEYKGQDFFGQFLRAREVLSPRQHEEPSSELSSLQKQKMHPAMYEDHVALGCHATRKLRCSERLPSFVKSRSCSCCNPCSPNGNRLTGSHIMEAEKCPLEKTTETPDVSTTITIAKPSGDESLEKQVSVGPRFQAEVPEWTGVFSESDSKWLGTHVWSLKNDTEPATATDVGRGRQEMCSCEFHGSVECVRLHIAENRMKLKLELGSEFYRLGFDRIGEEVSLQWTTEEEQRFKDIMKSNISSKNKYFWNNPSKYFPKKTRRNLVNYYFNVFLIQLRTYQNRVTPESVDSDDDEVEFGSFSDGFGMDAVKSLGDDFLECSLNKQCTDLKYTKLECKFDNWI* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0140 632 Pfam ARID/BRIGHT DNA binding domain 58 136 IPR001606 GO:0003677
Gso8g0140 632 SUPERFAMILY ARID-like 55 142 IPR036431 GO:0003677
Gso8g0140 632 ProSiteProfiles ARID domain profile. 48 140 IPR001606 GO:0003677
Gso8g0140 632 CDD ARID 54 136 - -
Gso8g0140 632 SMART ARID_2 45 136 - -
Gso8g0140 632 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 619 - -
Gso8g0140 632 MobiDBLite consensus disorder prediction 194 247 - -
Gso8g0140 632 SMART bright_3 49 141 IPR001606 GO:0003677
Gso8g0140 632 MobiDBLite consensus disorder prediction 214 235 - -
Gso8g0140 632 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 619 - -
Gso8g0140 632 Gene3D - 36 151 IPR036431 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0140 Gso-Chr8 1290480 1297794 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Gso8g0140 ARID 4.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0140 - - gmx:100816021 1295.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1782 5 41072206 41079979 Gso8g0140 8 1290480 1297794 GST