Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0133 ATGCGGTTGTGGTGGGGAAAGTCTTCTTCCAAAGAGTCGAAGAGGAAGGCAAACAAGGAAACTATTATTGATACAATACAGCGGAAATTAAAGAATACTTCTGAAGAGAAGTGCAACAATAAATCAGGAAGGTCAAGGAGACATCATGATGATGCCATATCTAAGAAGGGTTCTAGATCTCTCACACCTTCAACATCAGCATCACCCTCAACACATGTGTCTCGCGTTCCAAGTTTTACAGAAAGGCCTCTTTCTCAACCACTCCCATTACCAGGGTCACATCTTCCAGCTGCCATTGATGTAAGTTCTGGAGTTATTTTAACATCAAAACTGGAAAGAGCCATAGGCTCTAAGCTATCTCTGAATTTTCCTCTTCAAAAACCTGGCTATGTATCAAACAAGGAAGATCCTACAGATGCAGCAGGAGATATAGCCTCTGCATCTGTTTCTAGTGACAGCTCAATTGATAGTGGCAACTCATTTGATTCGCCACATCTTGTTAGTCCACTGGCATCTGACTGTGAAAATGGAAACCCAGCCACCATTAATAGTTCTTTAAGTGTGGTGCACAGGAATCAGTCACTTATTACTATCCAAAGAAACTCAAGAGCATCCTCAAAATCATCTCCTCAGTTGTGCAATAATAAAACTTCATCAACCTCACCAAGAGGGGCTCCATTACATCTGCAAAATCTGAAAATAGCTCAACCAGGTGGTTTGTGTAGTGCTCCAGATAGTTCAGTGTCAAGTCCTTCTAGAAATCAAATGGGAGCATTTGGACCTGAGCAAATGTTGAACTCTGAATTACACACAGGAAAGCCTTATCCAGATATACCTTCTGGGCGCTGCTATAATCCAGTTTCGGGTCGTGATTCTGGTCATAATTCAGTTGGGGGGGATATTTCAGGACAGATGATTTTGCCACAGAACAAGCGTAGCCCTGAGTGTTCTTCAATACCTAGTCCCAGAATTACAAGCCCTGGTCCCAGTTCCAGGACACAGAGTGGTACTGTGACCCCTCTGCATCCTAAAGCTGGAGGCGCTGCAGCAGAAGCACCTACAAGACGTCCTGATGATGTGAAACAAAAAAATCATCAGTTAGCAATTCCTCCAATAACAGCCACTAAATCTTGTCCATTTTCTCCAACCTATTCTGCATTGACAACTCCTTCAGCCCCTCGTAGTCCTGGCAGATCAGAAAATTCATCAAGCCCAGGTTCACGCTGGAAAAAGGGGCAGTTGCTTGGAAGGGGAACATTTGGACATGTATATCTTGGTTTTAACAGAGAATGTGGTGAGATGTGTGCAATGAAGGAGGTAACCCTTTTTTCTGATGATGCTAAATCAAGGGAAAGTGCGCAGCAACTTGGCCAAGAAATTGCAATGCTTAGTCAGTTGCGGCATCCAAATATTGTTCAGTATTATGGATCTGAGACGGTAGATGACAGACTTTATGTATACTTGGAGTATGTCTCTGGTGGGTCAATCTATAAGCTGGTTAAAGAATATGGCCAGTTAGGTGAAATTGCTATTCGTAATTATACTCGGCAAATTCTATTAGGACTTGCGTATTTGCACACCAAGAACACTGTTCACAGGGACATTAAAGGAGCAAACATATTGGTGGACCCTAGTGGGCGGATAAAATTGGCAGATTTTGGGATGGCAAAGCATATAAGCGGGTCCTCTTGTCCATTTTCTTTCAAAGGAAGTCCTTACTGGATGGCACCTGAGGTTATAAAAAATTCAAATGGTTGTAATCTTGCGGTTGATATATGGAGTCTAGGATGCACTGTTTTGGAGATGGCAACAACAAAACCTCCTTGGAGCCAATATGAAGGGGTTGCTGCTTTGTTTAAGATTGGGAATAGCAAGGAACTTCCTACAATTCCAGATCATCTATCAGAAGATGGAAAAGATTTTGTCAGGCTTTGTTTGCAAAGGAATCCTCTAAATCGTCCCTCAGCTGCTCAACTTCTAGATCATCCATTTGTTAAAAATGCTATGCTGGAAAGATCCATTTTAACTGCCGTTCCTTCAGAAGATCCAACTGCCATAATAAATGCAGTGAGATCTCTGGCCGTTGGACCTGTAAAACATAATTTATGCTTAGACTCAGAAGTGGCTGGGATCTATCCACTCAGAAGCTTGAGAACTGGTTCTGGATCAAGCAATGCTCATACACCAAGGAACATCTCTTGTCCCGTTTCTCCCTCTTTGCCTTATAAATCATTGCATAGAAGTGGAAGAATGTCTCCTTCTCCAATACCCAGCCCTAATACTGCATCTGGCTCATCTTCACCACTAACCAGTGGTGGCGGTGCTATTCCATTTCATCAGACAAAGCAACCACTATTTTCACATGAAGTTGTGGGTATGATCCAAAAGTCTCAGAATGGCGCTATTCCAACAGGTAGACCTTGTGCTGTGTCTGGCTCATCTTCACCACGAACCAGTGGCGGTGGTGTTGTCCCATTTCATCAGACAAAGAAGACACTATTATCATATGAAGTTGTGGGTATGATCCAAAAGTCTCGGAATGGTGCTATTCCAATATCTAGCCCTCATACTGCATCTGGTTCATCTTCGCCACTAACCAGTGGTGGTGGTGCCATTCCATTTCATCAGACAAAGCAACCACTATTCTCAAATGAAGTTGTGGCTATGATCCAAAAGTCTCAAAGTGGTGCTATTCCTATATCTAGCCCTCGTACTGGGTCTGGGTCATCTTCGCCACTAACCAGTGGTGGCGGTGCTATTCCATTTCATCAGACAAATCAACCACTATTCTCACATGAAGTTGTGGGTATGATCCAAAAGCCTCCGAATGTTTTTTATTCAAATGGAAATACTGCTTATCAGGGGTCTAAGCATGAGCAGTTTGGGAGAAACTTGCAAACTACACATCCTTGCTGGGATGTAGTTTCATCTGATAATGATGCTCTTCCAAACCATTCCAGGAGGGCTGTCCAGGGAGACCCAATAAAATTTCGTGATGAGAAGTCATGCTTGGCTGATTGTGTGTCACAGCAACTGTTGAGGGATTATGTTCGCCTAAATGCATGCCTTGATAATAAGCTCAATACCCCAAATCCTGATTGCATTAATGGCTTGTGA 3117 0.4296 MRLWWGKSSSKESKRKANKETIIDTIQRKLKNTSEEKCNNKSGRSRRHHDDAISKKGSRSLTPSTSASPSTHVSRVPSFTERPLSQPLPLPGSHLPAAIDVSSGVILTSKLERAIGSKLSLNFPLQKPGYVSNKEDPTDAAGDIASASVSSDSSIDSGNSFDSPHLVSPLASDCENGNPATINSSLSVVHRNQSLITIQRNSRASSKSSPQLCNNKTSSTSPRGAPLHLQNLKIAQPGGLCSAPDSSVSSPSRNQMGAFGPEQMLNSELHTGKPYPDIPSGRCYNPVSGRDSGHNSVGGDISGQMILPQNKRSPECSSIPSPRITSPGPSSRTQSGTVTPLHPKAGGAAAEAPTRRPDDVKQKNHQLAIPPITATKSCPFSPTYSALTTPSAPRSPGRSENSSSPGSRWKKGQLLGRGTFGHVYLGFNRECGEMCAMKEVTLFSDDAKSRESAQQLGQEIAMLSQLRHPNIVQYYGSETVDDRLYVYLEYVSGGSIYKLVKEYGQLGEIAIRNYTRQILLGLAYLHTKNTVHRDIKGANILVDPSGRIKLADFGMAKHISGSSCPFSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAALFKIGNSKELPTIPDHLSEDGKDFVRLCLQRNPLNRPSAAQLLDHPFVKNAMLERSILTAVPSEDPTAIINAVRSLAVGPVKHNLCLDSEVAGIYPLRSLRTGSGSSNAHTPRNISCPVSPSLPYKSLHRSGRMSPSPIPSPNTASGSSSPLTSGGGAIPFHQTKQPLFSHEVVGMIQKSQNGAIPTGRPCAVSGSSSPRTSGGGVVPFHQTKKTLLSYEVVGMIQKSRNGAIPISSPHTASGSSSPLTSGGGAIPFHQTKQPLFSNEVVAMIQKSQSGAIPISSPRTGSGSSSPLTSGGGAIPFHQTNQPLFSHEVVGMIQKPPNVFYSNGNTAYQGSKHEQFGRNLQTTHPCWDVVSSDNDALPNHSRRAVQGDPIKFRDEKSCLADCVSQQLLRDYVRLNACLDNKLNTPNPDCINGL* 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0133 1038 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 790 - -
Gso8g0133 1038 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 896 949 - -
Gso8g0133 1038 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 846 885 - -
Gso8g0133 1038 MobiDBLite consensus disorder prediction 802 825 - -
Gso8g0133 1038 Gene3D Transferase(Phosphotransferase) domain 1 407 689 - -
Gso8g0133 1038 Pfam Protein kinase domain 410 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0133 1038 MobiDBLite consensus disorder prediction 291 413 - -
Gso8g0133 1038 SUPERFAMILY Protein kinase-like (PK-like) 407 750 IPR011009 -
Gso8g0133 1038 MobiDBLite consensus disorder prediction 198 225 - -
Gso8g0133 1038 MobiDBLite consensus disorder prediction 7 56 - -
Gso8g0133 1038 MobiDBLite consensus disorder prediction 802 822 - -
Gso8g0133 1038 Coils Coil 16 36 - -
Gso8g0133 1038 MobiDBLite consensus disorder prediction 720 779 - -
Gso8g0133 1038 ProSiteProfiles Protein kinase domain profile. 409 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0133 1038 MobiDBLite consensus disorder prediction 57 81 - -
Gso8g0133 1038 MobiDBLite consensus disorder prediction 848 876 - -
Gso8g0133 1038 MobiDBLite consensus disorder prediction 132 160 - -
Gso8g0133 1038 MobiDBLite consensus disorder prediction 291 340 - -
Gso8g0133 1038 MobiDBLite consensus disorder prediction 1 89 - -
Gso8g0133 1038 MobiDBLite consensus disorder prediction 144 160 - -
Gso8g0133 1038 MobiDBLite consensus disorder prediction 751 777 - -
Gso8g0133 1038 ProSitePatterns Protein kinases ATP-binding region signature. 415 438 IPR017441 GO:0005524
Gso8g0133 1038 MobiDBLite consensus disorder prediction 895 921 - -
Gso8g0133 1038 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 790 - -
Gso8g0133 1038 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 846 885 - -
Gso8g0133 1038 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 896 949 - -
Gso8g0133 1038 CDD STKc_MEKK1_plant 408 665 - -
Gso8g0133 1038 MobiDBLite consensus disorder prediction 720 738 - -
Gso8g0133 1038 SMART serkin_6 409 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0133 1038 MobiDBLite consensus disorder prediction 368 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0133 Gso-Chr8 1224723 1233234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0133 4 789 MAP Kinase Kinase Kinase AT1G63700 59.825 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gso8g0133 Pkinase 2.4e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0133 K20717 - gmx:100814422 1990.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g0133 8 1224723 1233234 Gso4g1787 4 48067477 48073315 PCT
Gso8g0133 8 1224723 1233234 Gso6g1287 6 12589828 12595775 PCT