Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0119 ATGATTTATAGGGTTGGGATGGGTTGTGACTTTTCCAAGTACACAGTGTGCTGCACGGGTACGGAGCAAGATGGTCCGGCTGCTGAGGCTCAGGTTGATGGTGGAAACGAAGACAATGTTGTTGAGGGCGTTGACTTGCCGCGGTTTCATGAATTCACAATTGAACAGCTTAGGAGGGCTACATCCGGATTTGCCATTGAAAATATAGTTTCTGAACATGGAGAAAAGGCTCCAAATGTGGTCTATAAAGGGAAACTTGATAATCAGATGCGAATTGCTGTCAAACGGTTCAACAGAAATGCTTGGCCTGAAGCGCAACCATTTTTGGAGGAGGCTAGGGCTGTTGGTCAGCTAAGGAACCAAAGATTGATAAATCTGCTTGGATGTTGTTGTGAAGGTGAAGAAAGGTTACTTGTTGCAGAATATATGCCCAATGATACTTTGGCAAAGCATTTATTCCATTGGGAAACTCAGCCCATGAGATGGGCAATGCGAATGAGAGTTGCTCTGTGCCTTGCCCAAGCTCTAGAGTACTGTACCAGCAAAGGACGTGCTCTATATCATGATCTGAATGCTTACAGAGTTCTTTATGATGATGAATACAATCCTAGACTTTCATGCTTCGGTCTGATGAAAAATAGTAGAGATGGGAAAAGTTACAGTACAAATTTGGCATTCACTCCACCTGAATATCTGAGGACAGGCAGAGTTACTCCAGAGAGTGTAACTTATAGCTTTGGAACCCTTTTGCTTGACCTCCTCAGTGGCAAGCATATTCCTCCAAGCCGTGCCCTTGACCTAATTAGAGACAAGAACCTTCAAATGCTATCAGACTCTTGCTTAGAAGGAGAGCTTACAAATGATGATGGGACTGAATTAGTGCGTCTAGCCTCACGATGTTTGCAATCTGAACCACGAGAGCGTCCTAATCCAAAGTCACTGGTTGCTGCTCTAATACCTCTACAGAAGGATTCTGAGGTTCCTTCTAATGTGTTGATGGGTATCCCAGATGGTACAGCTGGTTTTCCCCTTTCACCTCTTGGAGAAGCTTGTCTACGAATGGATCTGACTGCCCTGCATGAGGTGATGGAGAAAATTGGGTATAAAGATGACGAGGGTGCAGCAACTGAGCTTTCATTCCAAATGTGGACGAACCAGATGCAGGAAACATTGAACTCAAAGAAGAAAGGGGACGCTGCTTTTCGGCACAAGGATTTTAAAACTGCAATTGATAGCTATACGATGTTCATTGATGTTGGAACCATGGTTTCTCCAACGATTTATGCACGTCGTAGTCTATGTTATCTGATGAGCAATATGCCCGATGAAGCACTTAATGATGCGATGCAAGCACAAGTAATATCCCCCGTTTGGTACATTGCGTTTTATTTACAAGCTGTTGCTCTTTTAGCACTGGGCAAGGAGAATGATGCCCAGGTGCCACTTAAAGAGGGTTCTTCGCTTGAAAATAAAAAGAACACAAATTAG 1488 0.4382 MIYRVGMGCDFSKYTVCCTGTEQDGPAAEAQVDGGNEDNVVEGVDLPRFHEFTIEQLRRATSGFAIENIVSEHGEKAPNVVYKGKLDNQMRIAVKRFNRNAWPEAQPFLEEARAVGQLRNQRLINLLGCCCEGEERLLVAEYMPNDTLAKHLFHWETQPMRWAMRMRVALCLAQALEYCTSKGRALYHDLNAYRVLYDDEYNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSRALDLIRDKNLQMLSDSCLEGELTNDDGTELVRLASRCLQSEPRERPNPKSLVAALIPLQKDSEVPSNVLMGIPDGTAGFPLSPLGEACLRMDLTALHEVMEKIGYKDDEGAATELSFQMWTNQMQETLNSKKKGDAAFRHKDFKTAIDSYTMFIDVGTMVSPTIYARRSLCYLMSNMPDEALNDAMQAQVISPVWYIAFYLQAVALLALGKENDAQVPLKEGSSLENKKNTN* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0119 495 SUPERFAMILY TPR-like 394 488 IPR011990 GO:0005515
Gso8g0119 495 SUPERFAMILY Protein kinase-like (PK-like) 47 326 IPR011009 -
Gso8g0119 495 Coils Coil 488 495 - -
Gso8g0119 495 ProSiteProfiles Protein kinase domain profile. 67 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0119 495 PANTHER TPR DOMAIN KINASE 7 495 - -
Gso8g0119 495 Gene3D Tetratricopeptide repeat domain 377 489 IPR011990 GO:0005515
Gso8g0119 495 Pfam Protein tyrosine and serine/threonine kinase 80 317 IPR001245 GO:0004672|GO:0006468
Gso8g0119 495 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 7 495 IPR045845 GO:0004672|GO:0009742
Gso8g0119 495 Gene3D Transferase(Phosphotransferase) domain 1 144 335 - -
Gso8g0119 495 Gene3D Phosphorylase Kinase; domain 1 40 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0119 Gso-Chr8 1100768 1111986 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0119 52 343 Glycoside Hydrolase AT3G07070 33.438 1.12e-40 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Gso8g0119 PK_Tyr_Ser-Thr 9.6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0119 K14500 - gmx:100819210 994.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1761 5 40865212 40875878 Gso8g0119 8 1100768 1111986 GST