Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso8g0111 | ATGAAGTTATATACTTCATTGTTGTTACTTGGTTTGGTTTCCATGCTCTCTTTTGTGGCTTCTGTCATGATCCCTTCAGGTGAAGTGTTGGCACTTAAAACTTTCAAGGAAGCTGTGTATGAAGATCCACATATGGTTTTGTCCAATTGGAATACTTTGGATTCAGATCTTTGTGACTGGAATGGTGTTTCTTGTACTGCAACTCGAGATCATGTCATCAAGCTTAATCTATCTGGGGCTTCATTAAGGGGATTTCTTGCTCCAGAATTTGGGAAAATTACCTACTTACAAGAACTGATCTTGCATGGAAACAGTCTCATTGGAGTAATACCTAAAGAATTGGGCATGTTGAACTCTCTCAAGGTGTTGGATTTGGGAATGAATCAGTTAACAGGACCAATTCCTCCAGAGATTGGAAATTTGACCCAAGTTATGAAAATAAACCTTCAGTCCAATGGGTTGACTGGTAGGCTACCTCCAGAGCTAGGAAAGTTGAAATACCTTCAAGAGCTTCGGCTGGATAGGAATAAGCTTCAAGGATCTCTTCCTGGTGGTGGCAGTTCAAATTTTTCTTCAAATATGCATGGGATGTATGCCTCGGGTGTGAATATGACTGGCTTCTGTCGTTTGTCTCAGTTAAAAGTTGCAGATTTTTCATATAACTTTTTTGTTGGTAGCATACCCAAATGCTTGGCATATCTTCCAAGATCAAGCTTTCAAGGAAATTGTCTCCATATCAAAGACATAAAACAGCGGATTTCGGTGCAATGTGCTGGTGCTTCGCCTGCCCAAAGCGGACCAGTAGTGAACCCAAGGTACCTACCTGCTACTAAACATGTGACCAAGCATCAAGAAGCATCAAAACCTGCTTGGCTTTTGGCTCTAGAAATAGTGACGGGAACCATGGTTGGTTCTCTCTTTATTATTGCTATTCTCTCTGCGATTCAGAGGTGTAACAACAAACCATCTATCATCATTCCTTGGAAAAAATCTGCAAGCGGAAAAGATTATATGGCAGTACATATAGACTCTGAGATGTTGAAGGATGTGATGAGTTATAGCAGACAGGACCTTGAAGTGGCCTGTGAAGACTTCAGCAACATAATTGGGTCCTCACCGGATAGTGTGGTCTACAAGGGTACCATGAAGGGTGGGCCTGAGATTGCTGTGATTTCCCTCTGCATCAAGGAAGATAATTGGACAGGATACCTTGAGCTCTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGGTTAAATCATGATAACACAGGAAAGCTGTTAGGATATTGTAGAGAGAGCAGTCCATTTACAAGGATGCTGGTTTTTGAATATGCATCAAATGGAACACTTTATGAGCACCTACATTGTTATGAAGAAGGGTGCCAGTTGTCTTGGACAAGGCGTATGAAAATTATCATAGGCATTGCCCGTGGACTCAAGTATTTGCACACTGAAATTGAGCCGGCGTTCACTATCTCAGAATTGAATTCCAATGCCGTTTACCTCACAGAAGATTTTTCCCCTAAGCTGGTTGATTTTGAAAGTTGGAAGACAATTCTTGAAAGATCCGAAAAAAATTCTGGTAATGTTAGTAGCCAGGGTGCTGTTTGTGTTCTACCAAACTCTCTTGAAGCGCGCCGTCTCGACACCAAAGGAAACATCTATGCTTTTGCTGTACTTCTATTGGAGATAATCAGTGGGAGACCTCCATACTGCAAGGACAAAGGGTACTTGGTGGATTGGGCTAGGGACTATCTTGAAATGCCAGAAGTAATGTCATATGTGGTGGATCCTGAGTTGAAACATTTTAGATATGAAGACCTCAAAGCAATATGTGAGGTGATAACTCTTTGCATCAATCCTGATCACTCTGTCCGTCCATCAATGCGTGAATTATGCACTATGTTGGAGAGCAAAATAGACACAACAATAAATTTGGAGCTAAAGGCATCATCACTGGCTTGGGCTGAACTAGCACTTTCGTCATAA | 1989 | 0.4163 | MKLYTSLLLLGLVSMLSFVASVMIPSGEVLALKTFKEAVYEDPHMVLSNWNTLDSDLCDWNGVSCTATRDHVIKLNLSGASLRGFLAPEFGKITYLQELILHGNSLIGVIPKELGMLNSLKVLDLGMNQLTGPIPPEIGNLTQVMKINLQSNGLTGRLPPELGKLKYLQELRLDRNKLQGSLPGGGSSNFSSNMHGMYASGVNMTGFCRLSQLKVADFSYNFFVGSIPKCLAYLPRSSFQGNCLHIKDIKQRISVQCAGASPAQSGPVVNPRYLPATKHVTKHQEASKPAWLLALEIVTGTMVGSLFIIAILSAIQRCNNKPSIIIPWKKSASGKDYMAVHIDSEMLKDVMSYSRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEDNWTGYLELYFQREVADLARLNHDNTGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHCYEEGCQLSWTRRMKIIIGIARGLKYLHTEIEPAFTISELNSNAVYLTEDFSPKLVDFESWKTILERSEKNSGNVSSQGAVCVLPNSLEARRLDTKGNIYAFAVLLLEIISGRPPYCKDKGYLVDWARDYLEMPEVMSYVVDPELKHFRYEDLKAICEVITLCINPDHSVRPSMRELCTMLESKIDTTINLELKASSLAWAELALSS* | 663 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso8g0111 | 662 | SUPERFAMILY | Protein kinase-like (PK-like) | 341 | 637 | IPR011009 | - | |
Gso8g0111 | 662 | PANTHER | PROTEIN MALE DISCOVERER 2 | 7 | 662 | - | - | |
Gso8g0111 | 662 | Gene3D | Ribonuclease Inhibitor | 141 | 259 | IPR032675 | - | |
Gso8g0111 | 662 | Gene3D | Ribonuclease Inhibitor | 28 | 140 | IPR032675 | - | |
Gso8g0111 | 662 | Gene3D | Phosphorylase Kinase; domain 1 | 337 | 444 | - | - | |
Gso8g0111 | 662 | Gene3D | Transferase(Phosphotransferase) domain 1 | 445 | 651 | - | - | |
Gso8g0111 | 662 | Pfam | Leucine rich repeat N-terminal domain | 27 | 65 | IPR013210 | - | |
Gso8g0111 | 662 | ProSiteProfiles | Protein kinase domain profile. | 363 | 644 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso8g0111 | 662 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 7 | 662 | - | - | |
Gso8g0111 | 662 | Pfam | Protein tyrosine and serine/threonine kinase | 367 | 635 | IPR001245 | GO:0004672|GO:0006468 | |
Gso8g0111 | 662 | SUPERFAMILY | L domain-like | 28 | 235 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso8g0111 | Gso-Chr8 | 1051488 | 1056736 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso8g0111 | 7 | 642 | Receptor kinase-like Gene Family | AT2G35620 | 28.092 | 5.52e-55 | 196 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VI-2 | Gso8g0111 | PK_Tyr_Ser-Thr | 9.7e-20 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso8g0111 | - | - | gmx:100781978 | 1288.48 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso5g1752 | 5 | 40822352 | 40827531 | Gso8g0111 | 8 | 1051488 | 1056736 | GST | |
Gso11g0213 | 11 | 1766274 | 1771226 | Gso8g0111 | 8 | 1051488 | 1056736 | PCT |