Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0111 ATGAAGTTATATACTTCATTGTTGTTACTTGGTTTGGTTTCCATGCTCTCTTTTGTGGCTTCTGTCATGATCCCTTCAGGTGAAGTGTTGGCACTTAAAACTTTCAAGGAAGCTGTGTATGAAGATCCACATATGGTTTTGTCCAATTGGAATACTTTGGATTCAGATCTTTGTGACTGGAATGGTGTTTCTTGTACTGCAACTCGAGATCATGTCATCAAGCTTAATCTATCTGGGGCTTCATTAAGGGGATTTCTTGCTCCAGAATTTGGGAAAATTACCTACTTACAAGAACTGATCTTGCATGGAAACAGTCTCATTGGAGTAATACCTAAAGAATTGGGCATGTTGAACTCTCTCAAGGTGTTGGATTTGGGAATGAATCAGTTAACAGGACCAATTCCTCCAGAGATTGGAAATTTGACCCAAGTTATGAAAATAAACCTTCAGTCCAATGGGTTGACTGGTAGGCTACCTCCAGAGCTAGGAAAGTTGAAATACCTTCAAGAGCTTCGGCTGGATAGGAATAAGCTTCAAGGATCTCTTCCTGGTGGTGGCAGTTCAAATTTTTCTTCAAATATGCATGGGATGTATGCCTCGGGTGTGAATATGACTGGCTTCTGTCGTTTGTCTCAGTTAAAAGTTGCAGATTTTTCATATAACTTTTTTGTTGGTAGCATACCCAAATGCTTGGCATATCTTCCAAGATCAAGCTTTCAAGGAAATTGTCTCCATATCAAAGACATAAAACAGCGGATTTCGGTGCAATGTGCTGGTGCTTCGCCTGCCCAAAGCGGACCAGTAGTGAACCCAAGGTACCTACCTGCTACTAAACATGTGACCAAGCATCAAGAAGCATCAAAACCTGCTTGGCTTTTGGCTCTAGAAATAGTGACGGGAACCATGGTTGGTTCTCTCTTTATTATTGCTATTCTCTCTGCGATTCAGAGGTGTAACAACAAACCATCTATCATCATTCCTTGGAAAAAATCTGCAAGCGGAAAAGATTATATGGCAGTACATATAGACTCTGAGATGTTGAAGGATGTGATGAGTTATAGCAGACAGGACCTTGAAGTGGCCTGTGAAGACTTCAGCAACATAATTGGGTCCTCACCGGATAGTGTGGTCTACAAGGGTACCATGAAGGGTGGGCCTGAGATTGCTGTGATTTCCCTCTGCATCAAGGAAGATAATTGGACAGGATACCTTGAGCTCTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGGTTAAATCATGATAACACAGGAAAGCTGTTAGGATATTGTAGAGAGAGCAGTCCATTTACAAGGATGCTGGTTTTTGAATATGCATCAAATGGAACACTTTATGAGCACCTACATTGTTATGAAGAAGGGTGCCAGTTGTCTTGGACAAGGCGTATGAAAATTATCATAGGCATTGCCCGTGGACTCAAGTATTTGCACACTGAAATTGAGCCGGCGTTCACTATCTCAGAATTGAATTCCAATGCCGTTTACCTCACAGAAGATTTTTCCCCTAAGCTGGTTGATTTTGAAAGTTGGAAGACAATTCTTGAAAGATCCGAAAAAAATTCTGGTAATGTTAGTAGCCAGGGTGCTGTTTGTGTTCTACCAAACTCTCTTGAAGCGCGCCGTCTCGACACCAAAGGAAACATCTATGCTTTTGCTGTACTTCTATTGGAGATAATCAGTGGGAGACCTCCATACTGCAAGGACAAAGGGTACTTGGTGGATTGGGCTAGGGACTATCTTGAAATGCCAGAAGTAATGTCATATGTGGTGGATCCTGAGTTGAAACATTTTAGATATGAAGACCTCAAAGCAATATGTGAGGTGATAACTCTTTGCATCAATCCTGATCACTCTGTCCGTCCATCAATGCGTGAATTATGCACTATGTTGGAGAGCAAAATAGACACAACAATAAATTTGGAGCTAAAGGCATCATCACTGGCTTGGGCTGAACTAGCACTTTCGTCATAA 1989 0.4163 MKLYTSLLLLGLVSMLSFVASVMIPSGEVLALKTFKEAVYEDPHMVLSNWNTLDSDLCDWNGVSCTATRDHVIKLNLSGASLRGFLAPEFGKITYLQELILHGNSLIGVIPKELGMLNSLKVLDLGMNQLTGPIPPEIGNLTQVMKINLQSNGLTGRLPPELGKLKYLQELRLDRNKLQGSLPGGGSSNFSSNMHGMYASGVNMTGFCRLSQLKVADFSYNFFVGSIPKCLAYLPRSSFQGNCLHIKDIKQRISVQCAGASPAQSGPVVNPRYLPATKHVTKHQEASKPAWLLALEIVTGTMVGSLFIIAILSAIQRCNNKPSIIIPWKKSASGKDYMAVHIDSEMLKDVMSYSRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEDNWTGYLELYFQREVADLARLNHDNTGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHCYEEGCQLSWTRRMKIIIGIARGLKYLHTEIEPAFTISELNSNAVYLTEDFSPKLVDFESWKTILERSEKNSGNVSSQGAVCVLPNSLEARRLDTKGNIYAFAVLLLEIISGRPPYCKDKGYLVDWARDYLEMPEVMSYVVDPELKHFRYEDLKAICEVITLCINPDHSVRPSMRELCTMLESKIDTTINLELKASSLAWAELALSS* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0111 662 SUPERFAMILY Protein kinase-like (PK-like) 341 637 IPR011009 -
Gso8g0111 662 PANTHER PROTEIN MALE DISCOVERER 2 7 662 - -
Gso8g0111 662 Gene3D Ribonuclease Inhibitor 141 259 IPR032675 -
Gso8g0111 662 Gene3D Ribonuclease Inhibitor 28 140 IPR032675 -
Gso8g0111 662 Gene3D Phosphorylase Kinase; domain 1 337 444 - -
Gso8g0111 662 Gene3D Transferase(Phosphotransferase) domain 1 445 651 - -
Gso8g0111 662 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Gso8g0111 662 ProSiteProfiles Protein kinase domain profile. 363 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0111 662 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 662 - -
Gso8g0111 662 Pfam Protein tyrosine and serine/threonine kinase 367 635 IPR001245 GO:0004672|GO:0006468
Gso8g0111 662 SUPERFAMILY L domain-like 28 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0111 Gso-Chr8 1051488 1056736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0111 7 642 Receptor kinase-like Gene Family AT2G35620 28.092 5.52e-55 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Gso8g0111 PK_Tyr_Ser-Thr 9.7e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0111 - - gmx:100781978 1288.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1752 5 40822352 40827531 Gso8g0111 8 1051488 1056736 GST
Gso11g0213 11 1766274 1771226 Gso8g0111 8 1051488 1056736 PCT