Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0100 ATGCCTCAGGGAAGCCTCGAAGTTTTTCTTGTTAACGCCAAAGGCCTTGAAAACACTGATTATCTTTGTAACATGGACCCTTATGTGATCCTCATATGTCGCACTCAGGAGCAAAAAAGCAGTGTTGCATCAGGTCAGGGAAGTGAGCCAGAATGGAACGAGGCTTTTGTATTCAACGTGTCTGAAGGCGTTTCCGATCTGAGATTGAAGATCATGGACAGTGATTCCACCACGGCTCATGATCTCGTTGGAGAAGCTACCATTCCACTGGATGGATTGTTTATCGAAGGAAATATCCCACCAACTTCATACAATGTTGTCAAGGATGGCCACTATTGTGGGGAGATTAGAATCGGCCTCACTTTTACTCCTCAGGATCGCAGTGAACGCTGCCCAGAGGAAAATTTTGGGGGATGGAAGGAGTCTGGTTACAGAGACTGA 441 0.4626 MPQGSLEVFLVNAKGLENTDYLCNMDPYVILICRTQEQKSSVASGQGSEPEWNEAFVFNVSEGVSDLRLKIMDSDSTTAHDLVGEATIPLDGLFIEGNIPPTSYNVVKDGHYCGEIRIGLTFTPQDRSERCPEENFGGWKESGYRD* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0100 146 MobiDBLite consensus disorder prediction 127 146 - -
Gso8g0100 146 PANTHER OS02G0640000 PROTEIN 1 142 - -
Gso8g0100 146 SMART C2_3c 5 102 IPR000008 -
Gso8g0100 146 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 125 IPR035892 -
Gso8g0100 146 Pfam C2 domain 4 93 IPR000008 -
Gso8g0100 146 Gene3D C2 domain 2 125 IPR035892 -
Gso8g0100 146 PANTHER C2 DOMAIN-CONTAINING 1 142 - -
Gso8g0100 146 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0100 Gso-Chr8 963025 964457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0100 4 128 C2H2 Transcription Factor Family AT4G21160 27.200 1.23e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0100 - - gmx:100806391 305.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1742 5 40726112 40728025 Gso8g0100 8 963025 964457 GST