LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso8g0094	ATGGAGAAACATCAAGTGTTGTCCCCTATTTCATCTTCATCATCTACTTCTCCATCTGACTTTAAACTTGGTGATCACAATTCTAATGCTCATGTCAAAAAGGCAGGTTTATTAAAAACTCAAAGGCCAAGCCTGAAAGGTGGCAAAGAAATCAAGCAGCACAGATATGCATTTCAAACAAGGAGTCATGTTGATATACTGGATGATGGGTACCGGTGGAGAAAGTATGGGGAGAAGTCCGTGAAAAACAATAAATTTCCTAGAAATTACTACAGATGTTCTTATCGAGGTTGCAATGTGAAGAAACAAATCCAACGCCATTCCAAAGACGAAGAGATTGTGGTAACAACCTATGAAGGGATACATATTCATCCTGTGGAGAAGTCAACTGAAAGCTTCGAGCAGATATTGAGAAACCATCACATATACAGCCTAACTCTATAA	444	0.3874	MEKHQVLSPISSSSSTSPSDFKLGDHNSNAHVKKAGLLKTQRPSLKGGKEIKQHRYAFQTRSHVDILDDGYRWRKYGEKSVKNNKFPRNYYRCSYRGCNVKKQIQRHSKDEEIVVTTYEGIHIHPVEKSTESFEQILRNHHIYSLTL*	148

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso8g0094	147	MobiDBLite	consensus disorder prediction	1	24	-	-
	Gso8g0094	147	SMART	WRKY_cls	67	126	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Gso8g0094	147	ProSiteProfiles	WRKY domain profile.	62	127	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Gso8g0094	147	Gene3D	WRKY domain	54	120	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Gso8g0094	147	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	1	143	IPR044810	GO:0003700
	Gso8g0094	147	SUPERFAMILY	WRKY DNA-binding domain	59	126	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Gso8g0094	147	PANTHER	WRKY FAMILY TRANSCRIPTION FACTOR	1	143	-	-
	Gso8g0094	147	MobiDBLite	consensus disorder prediction	1	49	-	-
	Gso8g0094	147	Pfam	WRKY DNA -binding domain	68	124	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso8g0094	Gso-Chr8	914634	915789	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso8g0094	54	144	WRKY Transcription Factor Family	AT5G13080	75.824	1.34e-50	156

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Gso8g0094		WRKY	2.1e-24	CL0274