Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0088 ATGGAGTTTGTGAAGAGAGTATTGGGAAGCAGCAAGAGATTGTATCCTGAAAACAGTGGTGGAAGTGGCAGCTACGGCAGAAGATTGAGCACCTCAAAGAAGAAGAAGAAGAAGGCTCCACAGGGTTGCATTTGCGTCTACGTTGGAGCCGAGAGAGAGAGATTCGTGATCAAGGTAAAGATCGCAAACCACCCTTTGTTCAAGGCGCTTTTGGACGCTGCTGAGAGAGAATATGGCTATCGAAACAATGGTCCCTTGTGGCTCCCTTGCGATGTTGACTTGTTCTCTGAGGCGCTTAAGGATATGGAAAATAGCATCCAAGGAGAAGAAGAAACGGGTTCTGTAGGTTGCGCCGCCTTTGCTGCGGGTCACAGTTTCCGGCGCAGCCCCTCATCAGCTTCTAATAATTACATCAGTTGTAGATATTTGTTGACGGGATCTGTCATTCACCATTACCAAACCCTTGTTAGTTGA 474 0.4747 MEFVKRVLGSSKRLYPENSGGSGSYGRRLSTSKKKKKKAPQGCICVYVGAERERFVIKVKIANHPLFKALLDAAEREYGYRNNGPLWLPCDVDLFSEALKDMENSIQGEEETGSVGCAAFAAGHSFRRSPSSASNNYISCRYLLTGSVIHHYQTLVS* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0088 157 PANTHER SMALL AUXIN-UP RNA-RELATED 1 132 - -
Gso8g0088 157 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 132 IPR003676 GO:0009733
Gso8g0088 157 MobiDBLite consensus disorder prediction 15 34 - -
Gso8g0088 157 Pfam Auxin responsive protein 30 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0088 Gso-Chr8 853221 853694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0088 30 99 Calmodulin-binding Proteins AT4G34750 42.857 8.64e-16 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0088 K14488 - gmx:102667331 296.975