Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0078 ATGGATGATGGCCACCAACACGAAAACAGCAGGCATAAGATGGAATTCTACAGAGGAGCACGTTCCCTGTGGAATACTGATTCCCAGCATCAAGTAAAAGAGCCAAATGCACTAGTTATGAATAAGAAGATTAGGTCCATTATGGCTGAAAGGCAGGCTGCCATTCTAGAAATTGAACTTGAGACTGCTATATCTGAAAAGAATGAAGCCTTAGCTGCTCGAGATGCAGCCATTCAGCAGAGGGATGAAGCACTTGCTCAGAGGGATAATGCCCTTTTGGAACGAGATAATGCCCTTGCTGCCCTTCAGAGTCGGAACAATTCTGTCAACTTCCCATTCGGTGGTGGAATTCAATGTGGATCAAAACGGATGCACCATTCTTCAAACCATCTATCTAACATGACTGAAGCTGCATACAGCACAAAGGATATGATAATAAGAGATGCCTCCCCGGTGACTGTTATACCTTCTGAAGCTGTCAATTCTCATCAAGCAAAGAGAACAAAGCAGAACAAGGTAATTAATTCAAAGGCATCAAAGCCACCCTGCAAAGTAAAGAAAATGGGGGAGGATTTAAATAGGCAGGCTTCTTCTGAAGGGACAAAGATCAGATCTGAATGGGATAAGCAGGATGTTGGCCTGAATTTGGTTGCATTTGATGAAACTATCATGCCGGTCCCAGTTTGCACATGTACGGGCATACCACGACAGTGCTACAAATGGGGGAATGGGGGATGGCAGTCATCTTGTTGTACTACAACATTGTCTATGTATCCACTACCACAACTTCCGAACAAGCGCCATGCCCGCATTGGAGGACGAAAGATGAGCGGAAGTGTCTTCACAAGACTTCTCAGTAGGTTGGTGTCAGAAGGCCATGATTTATCTATACCATTGGATCTTAAGGAATACTGGGCAAGACATGGAACAAATCGCTACATCACTATCAAGTAA 954 0.4423 MDDGHQHENSRHKMEFYRGARSLWNTDSQHQVKEPNALVMNKKIRSIMAERQAAILEIELETAISEKNEALAARDAAIQQRDEALAQRDNALLERDNALAALQSRNNSVNFPFGGGIQCGSKRMHHSSNHLSNMTEAAYSTKDMIIRDASPVTVIPSEAVNSHQAKRTKQNKVINSKASKPPCKVKKMGEDLNRQASSEGTKIRSEWDKQDVGLNLVAFDETIMPVPVCTCTGIPRQCYKWGNGGWQSSCCTTTLSMYPLPQLPNKRHARIGGRKMSGSVFTRLLSRLVSEGHDLSIPLDLKEYWARHGTNRYITIK* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0078 317 PANTHER PROTEIN BASIC PENTACYSTEINE4 1 317 - -
Gso8g0078 317 PANTHER - 1 317 IPR010409 -
Gso8g0078 317 Pfam GAGA binding protein-like family 1 317 IPR010409 -
Gso8g0078 317 SMART GAGA_bind_2 1 317 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0078 Gso-Chr8 742920 747043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0078 1 317 BBR or BPC Transcription factor family AT2G21240 57.994 2.21e-128 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Gso8g0078 GAGA_bind 8.4e-101 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0078 - - gmx:100785547 644.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1719 5 40455812 40459839 Gso8g0078 8 742920 747043 GST