Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0072 ATGAAGAACTTAGCAACATGGAAAACCATGGCAATTACTGTTGTGTTGCTTCAGCTGAGCTTTTCCTTGGAGATTTTCTGCCTCTCTTATCATGCAGATAGAATTGTTCGGCTTCCCGGGCAGCCCAACATAGGCTTCCAACAGTTCTCAGGATATGTTACAGTGGATGACATGAAACACAAGGCTCTCTTTTACTATTTTGTTGAATCAGAAACTGATCCAGCTTCAAAGCCTCTTGTTCTCTGGCTCAATGGAGGACCAGGTTGTTCTTCTCTTGGAGTGGGTGCATTCTCTGAAAATGGACCTTTTAGACCAAATGGAGAAGTTCTGATTAAAAATGAGTACAGTTGGAACAGAGAAACAAACATGTTGTATTTGGAGACACCAGTTGGAGTGGGGTTCTCTTATGCTAAAGGTGGCTCCTCCTATGACACTGTGAATGATGAGACAACAGCCAGGGACAATCTTGTATTCTTGCAACGCTGGTTCAACAAGTTCCCTCATTACAGACACACAGATTTGTTTCTAGCAGGTGAAAGTTATGCAGGGCATTATGTTCCACAACTTGCAAAGCTCATGATTGAAATAAACAAAAAGGAGAAGATGTTCAATCTGAAAGGAATAGCCTTGGGTAATCCAGTTCTAGAATATGCCACTGATTTTAACTCAAGGGCTGAGTTCTTTTGGTCTCATGGATTGATATCAGATTCAACATACAAATTGTTCACTACAGGTTGTAATTATTCGCGGTATGTCAGTGAATACTATAGAGACTCAATTTCGCCACTTTGTTCAAAGGTTATGAAGCAAGTAAGCAGAGAAACCAGTAAATTTGTGGACAAATATGATGTCACCCTTGATGTTTGTATTTCCTCAGTGCTTTCACAATCCAAAGCTATTTGTCCTCAAAGCCAACAAACAAATGAGAGCATAGATGTATGTGTAGATGACAAAGTTACAAATTACTTAAACCGAAAAGATGTACAAGAGGCACTCCATGCCAAGCTTGTTGGAGTTCAAAAGTGGAATGTTTGCAGCACCATTCTGGACTATGATATGCTCAACTTGGAGGTACCTACACTCCCTATAGTTGGATCACTCATAAAAGCTGGAGTTCGGGTCTTAATTTACAGTGGAGATCAAGATTCAGTAATTCCACTGACTGGAAGCCGCACCTTGGTTCAAAAGCTTGCTAGACAACTAAGGCTGAATACAACAATCCATTATAGAGTATGGTTTGAGGGCCAGCAGGTTGGTGGGTGGACTCAAGTTTATGGCAATATCCTCTCATTTGCAACAGTCAGAGGAGCCTCCCATGAAGCTCCTTTCTCACAGCCTGAAAGATCACTTGTTTTGTTCAAGTCATTCTTGGAAGATAGGCCCCTACCAGAAATTTTCTGA 1401 0.4111 MKNLATWKTMAITVVLLQLSFSLEIFCLSYHADRIVRLPGQPNIGFQQFSGYVTVDDMKHKALFYYFVESETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLIKNEYSWNRETNMLYLETPVGVGFSYAKGGSSYDTVNDETTARDNLVFLQRWFNKFPHYRHTDLFLAGESYAGHYVPQLAKLMIEINKKEKMFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYKLFTTGCNYSRYVSEYYRDSISPLCSKVMKQVSRETSKFVDKYDVTLDVCISSVLSQSKAICPQSQQTNESIDVCVDDKVTNYLNRKDVQEALHAKLVGVQKWNVCSTILDYDMLNLEVPTLPIVGSLIKAGVRVLIYSGDQDSVIPLTGSRTLVQKLARQLRLNTTIHYRVWFEGQQVGGWTQVYGNILSFATVRGASHEAPFSQPERSLVLFKSFLEDRPLPEIF* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0072 466 Pfam Serine carboxypeptidase 42 458 IPR001563 GO:0004185|GO:0006508
Gso8g0072 466 SUPERFAMILY alpha/beta-Hydrolases 36 463 IPR029058 -
Gso8g0072 466 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 28 464 IPR001563 GO:0004185|GO:0006508
Gso8g0072 466 ProSitePatterns Serine carboxypeptidases, histidine active site. 429 446 IPR033124 GO:0004185
Gso8g0072 466 Gene3D - 314 350 - -
Gso8g0072 466 PANTHER CARBOXYPEPTIDASE 28 464 - -
Gso8g0072 466 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
Gso8g0072 466 Gene3D - 360 458 - -
Gso8g0072 466 Gene3D alpha/beta hydrolase 29 291 IPR029058 -
Gso8g0072 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Gso8g0072 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Gso8g0072 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Gso8g0072 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 429 442 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0072 Gso-Chr8 694639 697796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0072 322 462 Calmodulin-binding Proteins AT2G22960 28.369 3.76e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0072 K16297 - gmx:100800002 949.118