Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0071 ATGGCAAAAGAGCAAAACCAGGGCAAAGGCCAAGAGAGAGAATTGGAACTGGAAAGGGAGGTTGAGATTGAGGCCCCATTGCCTCTCACTGTTACTTCTCGGGTTTTGTATATGTTGGGAGATATCACTGCAGGGCCTGCGTTTAGGTTCACGCAATGGCTCCAATTGGTTCGTAAACGCACCGCAAATTATCGTTCTTCTGGCTTCCCTCACCGCACTTCCACCACCATGCCTTCTAGCTCTTGCATCAGAGGATCGTTGGAGAATTCAAAATTGGAGCTGCATCCTGATCAGACAGAAACTAGCTTGTGGGAGAGGCTTGGGAAGGCTGCAATGTTGGACATTGAATCTGGCTCCTTTTCCTGGGACATGCTCTCTTCACTGCACCACACTGAACACAGCAGTAGCAACGAACATTCCGAGGATGAGATGAACAAAGCTCTCGAGGTAACTGTAAATTCAGGAGGAGTTGTCTTCTTTGCCTTTTTCAATATCCCTGGGAATGCTGATGCTAGTCCAAAAGAAGCAGCAGCTGTTATAAAGATAGCATCATCAAGAATGGCAACACAGTCTGAACGCCTTGGCTATGAACTTGCCAAGTGGATGGGAGTCCAAACTCCACAGGCTAGAGTTATTCACAATACCTGTTTAGAATGGCAACAAATAAAGGAAGCTTCAGAAAAAGCTAGAGAAGCAGCAAATTCTGAGGGTGATGAAATTGGTGAAGTGACATGTTTTGAACTTTTGGAAGCACTTGAGCTTAGCCGATGTCTCTTTTTTATGAGTTATGTACATGGTTCACCCTTGCTTGAAAACTCCAGTGCATTTAAGTCAAGGGAATCTGCAGAAAGAACGTCAGAAGCTCTTGGCAGGGTACTGATGCTGGACCTTGTCATCAGAAACGAAGATAGACTGCCTTGCCGTGAGCTTAGATGGCGAGGAAATCCTGCAAATTTGCTTTTGGCTGGAAAGAATATCTGTGCAAATACAGATGCACTAGAAGCAGCTTTTGATTCTGCAGTTAACCGATATAGACCAAAGGTGATCAGGGCATTTCATAAAGAAAGAAGGTCAACTTCAGTAGATTGCAGACTTGATTCTCATAATCCCGGCTTGATATCACAATCTTCTGATCTCTCGGACATCACAGAATCACCAAGATCTGCTGACATGAGCTTTCAAACATCGGGAGAATCACTGTCTCCTGACTTTAACATTGTAGCTATTGATTCTGGTGTTCCTCGGCGACCTCCTGCTGGAAAACGTGCAAATGATCAGGTTAATTATCCTAAGTTGGTTGAGTTGCTGGTCAATAGTTCTGAATTTGCCTCAAACCTGTTATATGATATAACCGGAGCGAAATTAGGATGTCCCCCACCAGAAGACATGGAAAAAACTGATGTACGTATTATAAGTGACACAATGTTTGTAGTTCATGCATTTCGTAATGGTTTCCGTGCTGCTCTTAGGGATCTGCAGGGATTCCATATATTCCTACTCACACTTCACCAAAGACTTGATACTTTGTTGCGATCATTTATGAACATTATAAGCAAAATATCTTTGGGGGAATTTGACAAAGAAGATTCTGTGGTTCCTGACTCACCTTCACTAACTGCTGGTGGGAGTTGTTCCTCTCCAACATGTAAGGAAAGACTTACTAATGATAACCATCAAGATTTTATTGATTCAGAATCACAGAGAACTGCTTTAAGATCATCATCTTCTGGCAATAGAGATTGCAGTGACTCTACTCCTATGTCAAGAGAAACTTGGCATGGAAAGTTCTGTAAAGGAAATGGGGAACCACTTCGTAGTCTCCGTTTGACTGCTAAGCTCCGTGACTTCCATAAATTTGCCAAGGTTGATGCTGAATCCAATAAAGAATTGGAACAGTGGAATGAAATGCTTAAAAGTGATGCCATCAAACTATGCCAGGAGAACAATTTCAACCCAGGATTTTTTGAGGGTAGTGATAATAACTGTGTCGTTGATGCATATGAACTTAAGGTCAGACTTGAGCATATTCTCGAGAGAATTGCATTGATATCAGACGCTGCAAGTACTGAGAAACCTTCAGCAGTGACAAGTAGTCTGTTCATTGGTGGAGCACTGGCTGCAAGATCTGTATACACACTGCAATACTTGGGAATCACAAATATTTTGTGTTTGTGTACCAATGAAATTGGACAGTCAGAAACTCAGTATCCTGATCTATTTGAGTACAAGAATTTCTCTGTATGTGACAGTGATGATTATAACATCAGCAGCATATTTGAAGAAGCGTGTGATTTTATAGACTATGTTGAACAAACAGGTCAAAAAGTTTTAGTTCATTGCTTTGAGGGGAGAAGCAGAAGTGTCACGTTGGTCCTCGCTTACTTAATGCTCAGGAAGAATCATACTTTATCAGAAGCATGGCAAGCTCTGAAACGAGTTCACCGTCGAGCACAACCCAATGACGGTTTTGCAAAGATCTTGTTAGAGTTGGATCAGAAACTTCATGGAAAGGTTTCAATGGAATGGCATCAGCGCAAACCAGTGATGAAAATCTGCCCCATATGTGGGAAGAATGCTGGACTAAGCAGCAGCTCACTCAAACTACATCTTCAGAAATCACATAAAAAGCTATCATCTGGGAGTGTAGATAGTGCCATGACTATGGAAATCCAGAAAGCATTAACAGCTTTGAAGATTAGCCGTGGTGGGAGTGTCAGCCCCACACAAAGATCATCTCATCCACTAATAGATCAATAG 2757 0.4229 MAKEQNQGKGQERELELEREVEIEAPLPLTVTSRVLYMLGDITAGPAFRFTQWLQLVRKRTANYRSSGFPHRTSTTMPSSSCIRGSLENSKLELHPDQTETSLWERLGKAAMLDIESGSFSWDMLSSLHHTEHSSSNEHSEDEMNKALEVTVNSGGVVFFAFFNIPGNADASPKEAAAVIKIASSRMATQSERLGYELAKWMGVQTPQARVIHNTCLEWQQIKEASEKAREAANSEGDEIGEVTCFELLEALELSRCLFFMSYVHGSPLLENSSAFKSRESAERTSEALGRVLMLDLVIRNEDRLPCRELRWRGNPANLLLAGKNICANTDALEAAFDSAVNRYRPKVIRAFHKERRSTSVDCRLDSHNPGLISQSSDLSDITESPRSADMSFQTSGESLSPDFNIVAIDSGVPRRPPAGKRANDQVNYPKLVELLVNSSEFASNLLYDITGAKLGCPPPEDMEKTDVRIISDTMFVVHAFRNGFRAALRDLQGFHIFLLTLHQRLDTLLRSFMNIISKISLGEFDKEDSVVPDSPSLTAGGSCSSPTCKERLTNDNHQDFIDSESQRTALRSSSSGNRDCSDSTPMSRETWHGKFCKGNGEPLRSLRLTAKLRDFHKFAKVDAESNKELEQWNEMLKSDAIKLCQENNFNPGFFEGSDNNCVVDAYELKVRLEHILERIALISDAASTEKPSAVTSSLFIGGALAARSVYTLQYLGITNILCLCTNEIGQSETQYPDLFEYKNFSVCDSDDYNISSIFEEACDFIDYVEQTGQKVLVHCFEGRSRSVTLVLAYLMLRKNHTLSEAWQALKRVHRRAQPNDGFAKILLELDQKLHGKVSMEWHQRKPVMKICPICGKNAGLSSSSLKLHLQKSHKKLSSGSVDSAMTMEIQKALTALKISRGGSVSPTQRSSHPLIDQ* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0071 918 MobiDBLite consensus disorder prediction 566 589 - -
Gso8g0071 918 MobiDBLite consensus disorder prediction 527 546 - -
Gso8g0071 918 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 760 812 IPR000387 GO:0016311|GO:0016791
Gso8g0071 918 MobiDBLite consensus disorder prediction 565 589 - -
Gso8g0071 918 Gene3D Protein tyrosine phosphatase superfamily 674 846 IPR029021 -
Gso8g0071 918 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 1 918 - -
Gso8g0071 918 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 691 836 IPR029021 -
Gso8g0071 918 ProSiteProfiles Dual specificity protein phosphatase domain profile. 691 836 IPR020422 GO:0006470|GO:0008138
Gso8g0071 918 SMART dsp_5 691 833 IPR020422 GO:0006470|GO:0008138
Gso8g0071 918 MobiDBLite consensus disorder prediction 374 396 - -
Gso8g0071 918 Gene3D - 268 379 IPR036940 GO:0016301
Gso8g0071 918 CDD DSP 692 829 - -
Gso8g0071 918 Pfam Dual specificity phosphatase, catalytic domain 712 832 IPR000340 GO:0008138|GO:0016311
Gso8g0071 918 Pfam Actin-fragmin kinase, catalytic 100 379 IPR015275 -
Gso8g0071 918 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 1 918 IPR035010 GO:0004721|GO:0009737|GO:0043622
Gso8g0071 918 SUPERFAMILY Protein kinase-like (PK-like) 52 426 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0071 Gso-Chr8 683708 692202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0071 6 914 Protein tyrosine phosphatase (PTP) family AT5G23720 64.502 0.0 1136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0071 K14165 - gmx:100799468 1763.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1713 5 40397962 40405616 Gso8g0071 8 683708 692202 GST