Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0060 ATGGCATTGCAGGCACCACCTAGCCTTCACACCGTCAATGGCAATGCTGGCCTGAGACGACCCTTGATGAATCCTTCTTCTTTTTCTCTAAAGTCATCTTTCTTCTCTGGTTCCCTCAATTTCTATCTTCATCCCAATCACCTCCATCTTACTTCAGCTCCACCCAGGATTTCCATGCGTGTTGCTTCCAAACAGGCCTATATCTGTCGAGATTGCGGGTATATTTACAAAGACAGGACTCCCTTTGAGAAGTTGCCTGATAACTACTTCTGCCCTGTTTGTGGTGCTCCAAAACGAAGATTTAGGCCCTATGCACCGGCTATCACTAAAAATGACAATGACACAGCTGTTAGAAAGGCACGAAAAGCAGAATTACAGAGAGATGAAGCAGTTGGGAAGGCACTTCCTATTGCAATTGGCGTGGGAATTGCAGTGCTTGCAGGATTATATTTCTATCTGAACAGCCAATACTAG 474 0.4515 MALQAPPSLHTVNGNAGLRRPLMNPSSFSLKSSFFSGSLNFYLHPNHLHLTSAPPRISMRVASKQAYICRDCGYIYKDRTPFEKLPDNYFCPVCGAPKRRFRPYAPAITKNDNDTAVRKARKAELQRDEAVGKALPIAIGVGIAVLAGLYFYLNSQY* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0060 157 ProSiteProfiles Rubredoxin-like domain profile. 64 104 IPR024934 GO:0005506
Gso8g0060 157 CDD rubredoxin 67 104 IPR024935 GO:0005506
Gso8g0060 157 PANTHER RUBREDOXIN-LIKE SUPERFAMILY PROTEIN 4 157 - -
Gso8g0060 157 SUPERFAMILY Rubredoxin-like 64 108 - -
Gso8g0060 157 Gene3D - 64 104 - -
Gso8g0060 157 Pfam Rubredoxin 67 101 IPR024935 GO:0005506
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0060 Gso-Chr8 555683 557416 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gso8g0060 Rubredoxin 1.6e-05 CL0045
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0060 - - gmx:100306219 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1698 5 40248089 40249871 Gso8g0060 8 555683 557416 GST
Gso8g0060 8 555683 557416 Gso4g1710 4 47114930 47116321 PCT
Gso8g0060 8 555683 557416 Gso6g1382 6 13553786 13555067 PCT
Gso4g1710 4 47114930 47116321 Gso8g0060 8 555683 557416 PCT
Gso6g1382 6 13553786 13555067 Gso8g0060 8 555683 557416 PCT