Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0045 ATGGAGAGGAAAACCATTGGGATTTTGTTCTTGGTCTTCCTTGTCTTACCTTCTGATGTGGCGGTGAAGAGAGCAGAGGGTCGAGACTGCTCGTCAAAAAGCCACGGGTTCAAGGGTTTATGCTTTAGCGACACCAACTGTGCACATGTATGCAGAACCGAAGGTTTCACCGGTGGAGACTGCGGAGGCTTCCGTCGCCGCTGCTTTTGCACCAGGATTTGTTGA 225 0.5111 MERKTIGILFLVFLVLPSDVAVKRAEGRDCSSKSHGFKGLCFSDTNCAHVCRTEGFTGGDCGGFRRRCFCTRIC* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0045 74 SUPERFAMILY Scorpion toxin-like 29 74 IPR036574 -
Gso8g0045 74 PANTHER DEFENSIN MTDEF4.7 1 74 - -
Gso8g0045 74 SMART gth_4 29 74 IPR003614 GO:0006952
Gso8g0045 74 CDD Knot1 39 71 IPR003614 GO:0006952
Gso8g0045 74 Pfam Gamma-thionin family 29 74 - -
Gso8g0045 74 ProSitePatterns Gamma-thionins family signature. 28 51 IPR008176 GO:0006952
Gso8g0045 74 Gene3D - 28 74 IPR036574 -
Gso8g0045 74 PRINTS Purothionin signature 29 44 IPR008176 GO:0006952
Gso8g0045 74 PRINTS Purothionin signature 59 73 IPR008176 GO:0006952
Gso8g0045 74 PANTHER DEFENSIN-LIKE PROTEIN 1 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0045 Gso-Chr8 427079 427554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0045 1 74 Plant Defensins Gene Families AT5G63660 56.757 8.08e-23 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0045 - - gmx:102666433 79.3369