Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0033 ATGGTTTTTTGGGATTCGAACTTGGAGATCAAAGAAGTTTATATGTTTCGCCAAAATTTGAGCAGGGGACCTCTCAAAATATTGACGAGGTGGCTCATATTCCTTACTATCTTACAAGTCAGTTGTGCTATCAAAGATCCTGATGTAGAAGGTGAAGCTCTGCTTGATCTTTTGCATTTCCTCAATGATTCCAATAAGCAAATAACGGACTGGGACAGTTTTTTAGTGAGCCCGTGCTTCAGTTGGTCTCATGTCACTTGTAGAAACGGGCATGTCATATCCCTGGCCTTGGCTTCAGTTGGATTTTCTGGAACGCTTTCTCCCTCAATTATCAAATTGAAGTATTTGTCTAGCTTAGAATTGCAGAACAACAACCTTTCTGGACCCTTGCCTGATTACATTTCCAACTTGACAGAGCTACAATATCTAAATCTTGCTGACAACAATTTTAATGGTTCTATACCAGCTAAATGGGGTGAAGTACCCAATCTAAAGCATCTGGATCTTTCATCTAATGGTCTTACGGGAAGCATCCCAAAGCAACTCTTTTCAGTTCCATTGTTTAACTTTACAGATACGCAACTTCAGTGTGGCCCTGGCTTCGAGCAGCCTTGCGCTTCTAAATCTGAAAATCCAGCTTCAGCTCACAAATCAAAATTGGCAAAAATTGTACGTTATGCAAGTTGTGGTGCATTTGCACTTCTGTGTCTTGGGGCTATCTTTACGTATCGACAACATCAAAAGCATAGGCGAAAAATTGATGTCTTTGTTGATGTTTCAGGTGAAGACGAGAGAAAGATTTCTTTCGGGCAATTGAGAAGATTTTCTTGGCGTGAACTTCAACTTGCCACTAAAAATTTCAGTGAAGGCAATGTAATTGGTCAGGGTGGCTTTGGAAAAGTGTACAAAGGAGTACTCTCTGATAACACAAAAGTCGCTGTGAAACGCCTCATTGATTATCACAATCCTGGTGGAGAGGCTGCATTCGAGAGAGAAGTTCAACTAATAAGTGTTGCAGTTCATAGAAACCTCCTAAGACTAATTGGCTTCTGCACAACCACAACTGAAAGAATCCTTGTATACCCTTTCATGGAAAATCTTAGTGTAGCATATCGACTGAGAGATTTAAAACCTGGTGAGAAAGGCTTGGACTGGCCAACAAGGAAACGCGTGGCTTTTGGCACTGCCCATGGTTTGGAGTATTTACATGAGCAATGCAATCCCAAGATAATACATCGTGATCTAAAGGCTGCAAATATCCTACTAGATGATGAATTTGAAGCTGTTCTAGGTGATTTTGGGCTAGCCAAGCTGGTTGATGCAAGGATGACTCATGTCACCACTCAAGTTAGGGGCACAATGGGTCACATTGCCCCAGAGTATTTGTCCACTGGAAAATCTTCAGAAAAGACTGATGTTTTTGGATATGGCATAACACTTCTTGAACTTGTCACCGGTGAGCGTGCATTAGACCTCTCTCGGCTTGAAGAGGACGAGGATGTTCTTCTGATTGATTATGTGAAAAAGCTGCTGAGAGAGAAAAGGTTGGAGGACATTGTTGATAGAAATTTGGAGAGTTATGATCCAAAGGAAGTTGAGACGATTCTACAGGTTGCATTGCTTTGCACCCAAGGCTATCCCGAGGATCGTCCAACCATGTCAGAGGTGGTGAAAATGCTGCAGGGAGTTGGCTTGGCAGATAGATGGGCTGACTGGCAGCAACTTGAAGAGGCTAGGAATCAAGAATTCTCACTCATGACTCACCAATTTGTTTGGAATGATGAGTCTACTCTTGATCAAGAAGCCATACAGCTTTCCAGAGCAAGATAA 1830 0.4208 MVFWDSNLEIKEVYMFRQNLSRGPLKILTRWLIFLTILQVSCAIKDPDVEGEALLDLLHFLNDSNKQITDWDSFLVSPCFSWSHVTCRNGHVISLALASVGFSGTLSPSIIKLKYLSSLELQNNNLSGPLPDYISNLTELQYLNLADNNFNGSIPAKWGEVPNLKHLDLSSNGLTGSIPKQLFSVPLFNFTDTQLQCGPGFEQPCASKSENPASAHKSKLAKIVRYASCGAFALLCLGAIFTYRQHQKHRRKIDVFVDVSGEDERKISFGQLRRFSWRELQLATKNFSEGNVIGQGGFGKVYKGVLSDNTKVAVKRLIDYHNPGGEAAFEREVQLISVAVHRNLLRLIGFCTTTTERILVYPFMENLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAHGLEYLHEQCNPKIIHRDLKAANILLDDEFEAVLGDFGLAKLVDARMTHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGERALDLSRLEEDEDVLLIDYVKKLLREKRLEDIVDRNLESYDPKEVETILQVALLCTQGYPEDRPTMSEVVKMLQGVGLADRWADWQQLEEARNQEFSLMTHQFVWNDESTLDQEAIQLSRAR* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0033 609 SUPERFAMILY Protein kinase-like (PK-like) 266 561 IPR011009 -
Gso8g0033 609 Gene3D Phosphorylase Kinase; domain 1 256 363 - -
Gso8g0033 609 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 27 609 - -
Gso8g0033 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
Gso8g0033 609 Gene3D Transferase(Phosphotransferase) domain 1 364 579 - -
Gso8g0033 609 Gene3D Ribonuclease Inhibitor 47 206 IPR032675 -
Gso8g0033 609 Pfam Leucine rich repeat 116 174 IPR001611 GO:0005515
Gso8g0033 609 SUPERFAMILY L domain-like 51 184 - -
Gso8g0033 609 Pfam Leucine rich repeat N-terminal domain 49 87 IPR013210 -
Gso8g0033 609 ProSiteProfiles Protein kinase domain profile. 287 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0033 609 ProSiteProfiles Leucine-rich repeat profile. 163 185 IPR001611 GO:0005515
Gso8g0033 609 Pfam Protein kinase domain 288 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0033 609 ProSitePatterns Protein kinases ATP-binding region signature. 293 315 IPR017441 GO:0005524
Gso8g0033 609 PANTHER LRR RECEPTOR-LIKE KINASE 27 609 - -
Gso8g0033 609 SMART serkin_6 287 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0033 Gso-Chr8 303585 309732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0033 32 609 Receptor kinase-like Gene Family AT5G10290 56.033 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Gso8g0033 Pkinase 2.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0033 - - gmx:100800886 1189.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1668 5 39965444 39971637 Gso8g0033 8 303585 309732 GST